SNAPOd2T00020544001 (Oikopleura dioica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SNAPOd2T00020544001 T230377_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.688 0.429
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.688 0.429
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.688 0.429
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.688 0.429
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.688 0.429
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.688 0.429
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.688 0.429
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.688 0.429
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.688 0.429
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.674 0.393
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.674 0.393
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.674 0.393
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00020544001 Homeodomain 75 103

Links

Other Homeodomain family TFs
Other Oikopleura dioica TFs

1199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06094 Capronia coronata A1O1_06094 N
A1O3_05625 Capronia epimyces A1O3_05625 N
A1O5_09655 Cladophialophora psammophila A1O5_09655 N
A1O7_03735 Cladophialophora yegresii A1O7_03735 N
A1O9_00579 Exophiala aquamarina A1O9_00579 N
ANIA_04247 Aspergillus nidulans CADANIAG00004410 N
AUEXF2481DRAFT_35357 Aureobasidium subglaciale AUEXF2481DRAFT_35357 N
Bcin02g05110 Botrytis cinerea Bcin02g05110 N
CADAFLAG00009814 Aspergillus flavus CADAFLAG00009814 N
CADAORAG00000414 Aspergillus oryzae CADAORAG00000414 N
COCC4DRAFT_198330 Bipolaris maydis COCC4DRAFT_198330 N
COCCADRAFT_40248 Bipolaris zeicola COCCADRAFT_40248 N
COCMIDRAFT_31558 Bipolaris oryzae COCMIDRAFT_31558 N
COCSADRAFT_298423 Bipolaris sorokiniana COCSADRAFT_298423 N
COCVIDRAFT_42182 Bipolaris victoriae COCVIDRAFT_42182 N
DOTSEDRAFT_73264 Dothistroma septosporum DOTSEDRAFT_73264 N
EPUS_07060 Endocarpon pusillum EPUS_07060 N
estExt_Genewise1Plus.C_120201 Mycosphaerella fijiensis estExt_Genewise1Plus.C_120201 N
EURHEDRAFT_407381 Aspergillus ruber EURHEDRAFT_407381 N
e_gw1.6.106.1 Mycosphaerella graminicola e_gw1.6.106.1 N
fgenesh1_pm.00129_#_102 Aspergillus carbonarius fgenesh1_pm.00129_#_102 N
G647_02028 Cladophialophora carrionii G647_02028 N
GMDG_05496 Pseudogymnoascus destructans GMDG_05496 N
HMPREF1120_03931 Exophiala dermatitidis HMPREF1120_03931 N
HMPREF1541_01554 Cyphellophora europaea HMPREF1541_01554 N
LEMA_P007270.1 Leptosphaeria maculans LEMA_P007270.1 N
M437DRAFT_58247 Aureobasidium melanogenum M437DRAFT_58247 N
M438DRAFT_341722 Aureobasidium pullulans M438DRAFT_341722 N
MBM_03061 Marssonina brunnea MBM_03061 N
MYCFIDRAFT_139431 Pseudocercospora fijiensis MYCFIDRAFT_139431 N
Mycgr3G43295 Zymoseptoria tritici Mycgr3G43295 N
OIDMADRAFT_168714 Oidiodendron maius OIDMADRAFT_168714 N
Pc13g02490 Penicillium chrysogenum Pc13g02490 N
PCH_Pc13g02490 Penicillium rubens PCH_Pc13g02490 N
PDE_02638 Penicillium oxalicum PDE_02638 N
PITC_088840 Penicillium italicum PITC_088840 N
PMAA_026040 Penicillium marneffei PMAA_026040 N
PMAA_026040 Talaromyces marneffei PMAA_026040 N
PTRG_11568 Pyrenophora triticirepentis PTRG_11568 N
PTT_14853 Pyrenophora teres PTT_14853 N
PV04_05609 Capronia semiimmersa PV04_05609 N
PV05_06830 Exophiala xenobiotica PV05_06830 N
PV06_04914 Exophiala oligosperma PV06_04914 N
PV07_08163 Cladophialophora immunda PV07_08163 N
PV08_10923 Exophiala spinifera PV08_10923 N
PV10_00661 Exophiala mesophila PV10_00661 N
PV11_05067 Exophiala sideris PV11_05067 N
PVAR5_1909 Byssochlamys spectabilis PVAR5_1909 N
SBOR_1756 Sclerotinia borealis SBOR_1756 N
SEPMUDRAFT_149101 Sphaerulina musiva SEPMUDRAFT_149101 N
SETTUDRAFT_117439 Setosphaeria turcica SETTUDRAFT_117439 N
SNOG_03308 Stagonospora nodorum SNOG_03308 N
SNOG_03309 Phaeosphaeria nodorum SNOG_03309 N
SS1G_11145 Sclerotinia sclerotiorum SS1G_11145 N
U727_00433680271 Penicillium solitum U727_00433680271 N
UCRNP2_7309 Neofusicoccum parvum UCRNP2_7309 N
V499_07479 Pseudogymnoascus pannorum V499_07479 N
W97_04778 Coniosporium apollinis W97_04778 N
Z517_11562 Fonsecaea pedrosoi Z517_11562 N
Z518_04782 Rhinocladiella mackenziei Z518_04782 N
Z519_10549 Cladophialophora bantiana Z519_10549 N