chr1.LjT05B18.50.nd (Lotus japonicus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 chr1.LjT05B18.50.nd T230804_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT

AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.826 0.860
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN

NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.798 0.842
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD

HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.798 0.842
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN

NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.796 0.807
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW

WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.796 0.807
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN

NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.796 0.807
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN

NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.773 0.702
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV

BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.773 0.702
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN

NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.763 0.842
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN

NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.763 0.842
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV

BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.763 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.LjT05B18.50.nd Homeodomain 84 140

Links

Other Homeodomain family TFs
Other Lotus japonicus TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB06533.1 Alternaria brassicicola AB06533.1 N 0.000
ACRE_067850 Acremonium chrysogenum ACRE_067850 I 0.000
AUEXF2481DRAFT_374368 Aureobasidium subglaciale AUEXF2481DRAFT_374368 I 0.000
BBA_09189 Beauveria bassiana BBA_09189 I 0.000
BGHDH14_bgh05094 Blumeria graminis BGHDH14_bgh05094 I 0.000
CCM_09080 Cordyceps militaris CCM_09080 I 0.000
CFIO01_10198 Colletotrichum fioriniae CFIO01_10198 I 0.000
CH063_08735 Colletotrichum higginsianum CH063_08735 I 0.000
CHGG_07364 Chaetomium globosum CHGG_07364 I 0.000
CMQ_7699 Grosmannia clavigera CMQ_7699 I 0.000
COCC4DRAFT_46985 Bipolaris maydis COCC4DRAFT_46985 N 0.000
COCCADRAFT_82274 Bipolaris zeicola COCCADRAFT_82274 N 0.000
COCMIDRAFT_8999 Bipolaris oryzae COCMIDRAFT_8999 N 0.000
COCSADRAFT_25239 Bipolaris sorokiniana COCSADRAFT_25239 N 0.000
COCVIDRAFT_37014 Bipolaris victoriae COCVIDRAFT_37014 N 0.000
col-26 Neurospora crassa NCU07788 D 0.000
CPUR_08028 Claviceps purpurea CPUR_08028 I 0.000
CSUB01_05898 Colletotrichum sublineola CSUB01_05898 I 0.000
CTHT_0068480 Chaetomium thermophilum CTHT_0068480 I 0.000
estExt_fgenesh1_pg.C_40234 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40234 N 0.000
estExt_fgenesh1_pg.C_chr_10960 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10960 I 0.000
estExt_Genewise1.C_12176 Mycosphaerella fijiensis estExt_Genewise1.C_12176 I 0.000
estExt_Genewise1Plus.C_13371 Cryphonectria parasitica estExt_Genewise1Plus.C_13371 I 0.000
estExt_Genewise1Plus.C_140234 Neurospora discreta estExt_Genewise1Plus.C_140234 I 0.000
F503_04220 Ophiostoma piceae uamh F503_04220 I 0.000
GGTG_06006 Gaeumannomyces graminis GGTG_06006 I 0.000
GLRG_01145 Colletotrichum graminicola GLRG_01145 I 0.000
GMDG_01905 Pseudogymnoascus destructans GMDG_01905 I 0.000
gw1.14.468.1 Nectria haematococca gw1.14.468.1 I 0.000
LEMA_P115290.1 Leptosphaeria maculans LEMA_P115290.1 N 0.000
M437DRAFT_67933 Aureobasidium melanogenum M437DRAFT_67933 I 0.000
M438DRAFT_155623 Aureobasidium pullulans M438DRAFT_155623 I 0.000
MAC_05572 Metarhizium acridum MAC_05572 I 0.000
MAJ_06898 Metarhizium majus MAJ_06898 I 0.000
MAM_04875 Metarhizium album MAM_04875 I 0.000
MANI_011912 Metarhizium anisopliae MANI_011912 I 0.000
MAPG_04263 Magnaporthe poae MAPG_04263 I 0.000
MBR_05015 Metarhizium brunneum MBR_05015 I 0.000
MGG_05343 Magnaporthe oryzae MGG_05343 I 0.000
MGU_01655 Metarhizium guizhouense MGU_01655 I 0.000
MPH_08875 Macrophomina phaseolina MPH_08875 N 0.000
MYCFIDRAFT_127068 Pseudocercospora fijiensis MYCFIDRAFT_127068 I 0.000
Mycgr3G107320 Zymoseptoria tritici Mycgr3G107320 I 0.000
MYCTH_2301920 Myceliophthora thermophila MYCTH_2301920 I 0.000
NechaG22260 Fusarium solani NechaG22260 I 0.000
NEUTE1DRAFT_59081 Neurospora tetrasperma NEUTE1DRAFT_59081 I 0.000
OCS_01944 Ophiocordyceps sinensis OCS_01944 I 0.000
PFICI_10998 Pestalotiopsis fici PFICI_10998 I 0.000
PODANS_2_4060 Podospora anserina PODANS_2_4060 I 0.000
PTT_02079 Pyrenophora teres PTT_02079 N 0.000
PV09_00811 Verruconis gallopava PV09_00811 N 0.000
PVAR5_1180 Byssochlamys spectabilis PVAR5_1180 I 0.000
S40285_00097 Stachybotrys chlorohalonata S40285_00097 I 0.000
S40288_01569 Stachybotrys chartarum S40288_01569 I 0.000
SAPIO_CDS0393 Scedosporium apiospermum SAPIO_CDS0393 I 0.000
SEPMUDRAFT_146091 Sphaerulina musiva SEPMUDRAFT_146091 I 0.000
SETTUDRAFT_174289 Setosphaeria turcica SETTUDRAFT_174289 N 0.000
SMAC_08231 Sordaria macrospora SMAC_08231 I 0.000
THITE_2108095 Thielavia terrestris THITE_2108095 I 0.000
TRIATDRAFT_11573 Trichoderma atroviride TRIATDRAFT_11573 I 0.000
TRIREDRAFT_52368 Trichoderma reesei TRIREDRAFT_52368 I 0.000
TRIVIDRAFT_156582 Trichoderma virens TRIVIDRAFT_156582 I 0.000
UCREL1_10245 Eutypa lata UCREL1_10245 I 0.000
UCRNP2_458 Neofusicoccum parvum UCRNP2_458 N 0.000
UV8b_5300 Ustilaginoidea virens UV8b_5300 I 0.000
V499_05963 Pseudogymnoascus pannorum V499_05963 I 0.000
VDAG_04640 Verticillium dahliae VDAG_04640 I 0.000
VDBG_09402 Verticillium alfalfae VDBG_09402 I 0.000
VDBG_09402 Verticillium albo atrum VDBG_09402 I 0.000
VHEMI08540 Torrubiella hemipterigena VHEMI08540 I 0.000
X797_001512 Metarhizium robertsii X797_001512 I 0.000