CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMIN011124
(
Anopheles minimus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
AMIN011124
T232167_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
achi
M03860_2.00
Drosophila melanogaster
TGACAD
HTGTCA
SELEX
Nitta et al.(2015)
achi_1
0.867
0.945
achi
M03861_2.00
Drosophila melanogaster
TGACAGMTGTCA
TGACAKCTGTCA
SELEX
Nitta et al.(2015)
achi_2
0.867
0.945
achi
M03862_2.00
Drosophila melanogaster
TGACAGNNNNNNYGTCA
TGACRNNNNNNCTGTCA
SELEX
Nitta et al.(2015)
achi_3
0.867
0.945
vis
M03859_2.00
Drosophila melanogaster
TGACAS
STGTCA
SELEX
Nitta et al.(2015)
vis_1
0.867
0.945
vis
M06534_2.00
Drosophila melanogaster
TGACAB
BTGTCA
B1H
Mathelier et al.(2014)
MA0252.1
0.867
0.945
achi
M06535_2.00
Drosophila melanogaster
TGACAG
CTGTCA
B1H
Mathelier et al.(2014)
MA0207.1
0.867
0.945
achi
M06345_2.00
Drosophila melanogaster
TGTCADW
WHTGACA
B1H
Zhu et al.(2011)
Achi_Cell_FBgn0033749
0.867
0.945
achi
M06346_2.00
Drosophila melanogaster
HTGACA
TGTCAD
B1H
Zhu et al.(2011)
Achi_SOLEXA_FBgn0033749
0.867
0.945
vis
M06343_2.00
Drosophila melanogaster
TGTCA
TGACA
B1H
Zhu et al.(2011)
Vis_Cell_FBgn0033748
0.867
0.945
vis
M06344_2.00
Drosophila melanogaster
TGTCAD
HTGACA
B1H
Zhu et al.(2011)
Vis_SOLEXA_FBgn0033748
0.867
0.945
Tgif2
M00521_2.00
Mus musculus
NNTGACANNN
NNNTGTCANN
PBM
Berger et al.(2008)
Tgif2_3451
0.822
0.745
TGIF2
M03123_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
TGIF2_1
0.822
0.745
TGIF2
M05032_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2_eDBD_HT-SELEX
0.822
0.745
TGIF2
M05034_2.00
Homo sapiens
DTGACANN
NNTGTCAH
SELEX
Yin et al.(2017)
TGIF2_FL_HT-SELEX
0.822
0.745
TGIF2
M05033_2.00
Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA
SELEX
Yin et al.(2017)
TGIF2_eDBD_Methyl-HT-SELEX
0.822
0.745
TGIF2
M05035_2.00
Homo sapiens
DTGACANN
NNTGTCAH
SELEX
Yin et al.(2017)
TGIF2_FL_Methyl-HT-SELEX
0.822
0.745
Tgif1
M00500_2.00
Mus musculus
NNTGACANNN
NNNTGTCANN
PBM
Berger et al.(2008)
Tgif1_2342
0.767
0.709
TGIF1
M03223_2.00
Homo sapiens
TGACAGCTGTCA
TGACAGCTGTCA
SELEX
Jolma et al.(2013)
TGIF1_1
0.767
0.709
TGIF1
M05317_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Yin et al.(2017)
TGIF1_eDBD_HT-SELEX
0.767
0.709
TGIF1
M09159_2.00
Homo sapiens
TGACAGS
SCTGTCA
Misc
Kulakovskiy et al.(2013)
TGIF1_HUMAN.H11MO.0.A
0.767
0.709
Tgif1
M09211_2.00
Mus musculus
TGACAGBNV
BNVCTGTCA
Misc
Kulakovskiy et al.(2013)
TGIF1_MOUSE.H11MO.0.A
0.767
0.709
TGIF1
M10740_2.00
Homo sapiens
WHNTGACARST
ASYTGTCANDW
Transfac
Matys et al.(2006)
V$TGIF_01
0.767
0.709
TGIF1
M05318_2.00
Homo sapiens
TGACAKVTGTCA
TGACABMTGTCA
SELEX
Yin et al.(2017)
TGIF1_eDBD_Methyl-HT-SELEX
0.767
0.709
TGIF2LX
M03171_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
TGIF2LX_1
0.664
0.618
TGIF2LX
M05191_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_eDBD_HT-SELEX
0.664
0.618
TGIF2LX
M05193_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_FL_HT-SELEX
0.664
0.618
TGIF2LX
M05192_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_eDBD_Methyl-HT-SELEX
0.664
0.618
TGIF2LX
M05194_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_FL_Methyl-HT-SELEX
0.664
0.618
TGIF2LY
M05313_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LY_eDBD_HT-SELEX
0.664
0.600
TGIF2LY
M05314_2.00
Homo sapiens
YGACABVTGTCR
YGACABVTGTCR
SELEX
Yin et al.(2017)
TGIF2LY_eDBD_Methyl-HT-SELEX
0.664
0.600
hth
M06490_2.00
Drosophila melanogaster
TGACAK
MTGTCA
B1H
Mathelier et al.(2014)
MA0227.1
0.657
0.527
hth
M06252_2.00
Drosophila melanogaster
TGTCA
TGACA
B1H
Zhu et al.(2011)
Hth_Cell_FBgn0001235
0.657
0.527
hth
M06253_2.00
Drosophila melanogaster
NNTGACAD
HTGTCANN
B1H
Zhu et al.(2011)
hth_SOLEXA_2_FBgn0001235
0.657
0.527
hth
M06254_2.00
Drosophila melanogaster
NTGACA
TGTCAN
B1H
Zhu et al.(2011)
Hth_SOLEXA_FBgn0001235
0.657
0.527
Meis1
M00407_2.00
Mus musculus
NTGACADNN
NNHTGTCAN
PBM
Berger et al.(2008)
Meis1_2335
0.657
0.509
Meis2
M00437_2.00
Mus musculus
NTGACANNN
NNNTGTCAN
PBM
Berger et al.(2008)
Mrg1_2246
0.657
0.509
Meis3
M00488_2.00
Mus musculus
NTGACANNN
NNNTGTCAN
PBM
Berger et al.(2008)
Mrg2_2302
0.657
0.509
MEIS1
M03165_2.00
Homo sapiens
NTGACAN
NTGTCAN
SELEX
Jolma et al.(2013)
MEIS1_1
0.657
0.509
MEIS2
M03147_2.00
Homo sapiens
WTGACAGSTGTCAM
KTGACASCTGTCAW
SELEX
Jolma et al.(2013)
MEIS2_1
0.657
0.509
MEIS2
M03148_2.00
Homo sapiens
DTGACAGS
SCTGTCAH
SELEX
Jolma et al.(2013)
MEIS2_2
0.657
0.509
Meis2
M03261_2.00
Mus musculus
NTGACAN
NTGTCAN
SELEX
Jolma et al.(2013)
Meis2_1
0.657
0.509
Meis2
M03262_2.00
Mus musculus
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis2_2
0.657
0.509
Meis3
M03279_2.00
Mus musculus
NTGACAN
NTGTCAN
SELEX
Jolma et al.(2013)
Meis3_1
0.657
0.509
Meis3
M03280_2.00
Mus musculus
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis3_2
0.657
0.509
MEIS2
M02740_2.00
Homo sapiens
TGACASSTGTC
GACASSTGTCA
SELEX
Jolma et al.(2010)
MEIS2_dimer
0.657
0.509
MEIS2
M02741_2.00
Homo sapiens
GGACAKNT
ANMTGTCC
SELEX
Jolma et al.(2010)
MEIS2_monomer
0.657
0.509
MEIS2
M05138_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_eDBD_HT-SELEX
0.657
0.509
MEIS2
M05140_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_HT-SELEX
0.657
0.509
MEIS1
M09148_2.00
Homo sapiens
NTGATTDATDDB
VHHATHAATCAN
Misc
Kulakovskiy et al.(2013)
MEIS1_HUMAN.H11MO.0.A
0.657
0.509
MEIS2
M09143_2.00
Homo sapiens
HTGACAGBTKTBM
KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_HUMAN.H11MO.0.B
0.657
0.509
Meis1
M09178_2.00
Mus musculus
NTGATTDATDDB
VHHATHAATCAN
Misc
Kulakovskiy et al.(2013)
MEIS1_MOUSE.H11MO.0.A
0.657
0.509
Meis2
M09189_2.00
Mus musculus
HTGACAGBTKTBM
KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_MOUSE.H11MO.0.B
0.657
0.509
Meis1
M09568_2.00
Mus musculus
VBTGWCASNN
NNSTGWCAVB
Misc
Heinz et al.(2010)
MastCells-Meis1_GSE48085
0.657
0.509
MEIS1
M10709_2.00
Homo sapiens
NHNTGACAGNDN
NHNCTGTCANDN
Transfac
Matys et al.(2006)
V$MEIS1_01
0.657
0.509
MEIS1
M10710_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEIS1_06
0.657
0.509
MEIS2
M05139_2.00
Homo sapiens
YGACASSYGHCR
YGDCRSSTGTCR
SELEX
Yin et al.(2017)
MEIS2_eDBD_Methyl-HT-SELEX
0.657
0.509
MEIS2
M05141_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_Methyl-HT-SELEX
0.657
0.509
unc-62
M02185_2.00
Caenorhabditis elegans
NHDAHANNN
NNNTDTHDN
PBM
Weirauch et al.(2014)
pTH5781
0.632
0.491
Pknox2
M00468_2.00
Mus musculus
NNNGACRNNN
NNNYGTCNNN
PBM
Berger et al.(2008)
Pknox2_3077
0.622
0.527
PKNOX2
M03195_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
PKNOX2_1
0.622
0.527
Pknox2
M03270_2.00
Mus musculus
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
Pknox2_1
0.622
0.527
PKNOX2
M05246_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
PKNOX2_eDBD_HT-SELEX
0.622
0.527
PKNOX2
M05247_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
PKNOX2_eDBD_Methyl-HT-SELEX
0.622
0.527
Pknox1
M00399_2.00
Mus musculus
HGACRNNN
NNNYGTCD
PBM
Berger et al.(2008)
Pknox1_2364
0.622
0.509
PKNOX1
M03178_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
PKNOX1_1
0.622
0.509
PKNOX1
M05206_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
PKNOX1_eDBD_HT-SELEX
0.622
0.509
PKNOX1
M05208_2.00
Homo sapiens
TGACAGCTGTCA
TGACAGCTGTCA
SELEX
Yin et al.(2017)
PKNOX1_FL_HT-SELEX
0.622
0.509
PKNOX1
M09150_2.00
Homo sapiens
TGABTGRCRGV
BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PKNX1_HUMAN.H11MO.0.B
0.622
0.509
Pknox1
M09175_2.00
Mus musculus
TGABTGRCRGV
BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PKNX1_MOUSE.H11MO.0.A
0.622
0.509
PKNOX1
M10712_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PREP1_Q3
0.622
0.509
PKNOX1
M05207_2.00
Homo sapiens
YGWCASSTGWCR
YGWCASSTGWCR
SELEX
Yin et al.(2017)
PKNOX1_eDBD_Methyl-HT-SELEX
0.622
0.509
PKNOX1
M05209_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
PKNOX1_FL_Methyl-HT-SELEX
0.622
0.509
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMIN011124-PA
Homeodomain
99
156
RKRRGNLPKQSVKILKRWLYEHRFNAYPTDAEKLTLSQEANLTVLQVCNWFINARRRI
Links
Other
Homeodomain
family TFs
Other
Anopheles minimus
TFs
797 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000327
Anopheles albimanus
AALB000327
I
0.000
AARA005138
Anopheles arabiensis
AARA005138
I
0.000
AARA011457
Anopheles arabiensis
AARA011457
I
0.000
ACEP26487
Atta cephalotes
ACEP26487
I
0.000
ACHR004287
Anopheles christyi
ACHR004287
I
0.000
ADIR006768
Anopheles dirus
ADIR006768
I
0.000
AEPI004828
Anopheles epiroticus
AEPI004828
I
0.000
Afo_R006907
Aptenodytes forsteri
Afo_R006907
I
0.000
AFUN001295
Anopheles funestus
AFUN001295
I
0.000
Alligator_sinensis_CCG010661.1
Alligator sinensis
Alligator_sinensis_CCG010661.1
I
0.000
AMAM003654
Anopheles maculatus
AMAM003654
I
0.000
AMAM009154
Anopheles maculatus
AMAM009154
I
0.000
AMEC008489
Anopheles melas
AMEC008489
I
0.000
AMEC011816
Anopheles melas
AMEC011816
I
0.000
AMEC016887
Anopheles melas
AMEC016887
I
0.000
AMIN005749
Anopheles minimus
AMIN005749
I
0.000
AMIN006279
Anopheles minimus
AMIN006279
I
0.000
ANCCEY_13939
Ancylostoma ceylanicum
ANCCEY_13939
I
0.000
ANCDUO_09759
Ancylostoma duodenale
ANCDUO_09759
I
0.000
AQUA000678
Anopheles quadriannulatus
AQUA000678
I
0.000
augustus_masked-nMf.1.1.scaf20573-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf20573-processed-gene-0.0
I
0.000
A_07396
Schistosoma haematobium
A_07396
I
0.000
A_07699
Schistosoma haematobium
A_07699
I
0.000
BARX2
Tupaia belangeri
ENSTBEG00000000641
I
0.000
BARX2
Vicugna pacos
ENSVPAG00000010480
I
0.000
BGLB001705
Biomphalaria glabrata
BGLB001705
I
0.000
BGLB005976
Biomphalaria glabrata
BGLB005976
I
0.000
BTMF_0000212801
Brugia timori
BTMF_0000212801
I
0.000
CGOC_0000387301
Cylicostephanus goldi
CGOC_0000387301
I
0.000
CLEC007143
Cimex lectularius
CLEC007143
I
0.000
CLEC013163
Cimex lectularius
CLEC013163
I
0.000
CPIJ001077
Culex quinquefasciatus
CPIJ001077
I
0.000
CpipJ_CPIJ001077
Culex pipiens
CpipJ_CPIJ001077
I
0.000
Crx
Mus musculus
ENSMUSG00000041578
D
0.000
D915_08446
Fasciola hepatica
D915_08446
I
0.000
D918_03366
Trichuris suis
D918_03366
I
0.000
DME_0000391201
Dracunculus medinensis
DME_0000391201
I
0.000
en1
Xenopus tropicalis
XB-GENE-5737237
I
0.000
ENSCING00000013809
Ciona intestinalis
ENSCING00000013809
I
0.000
ENSDNOG00000040223
Dasypus novemcinctus
ENSDNOG00000040223
I
0.000
ENSMEUG00000002781
Macropus eugenii
ENSMEUG00000002781
I
0.000
ENSMICG00000002512
Microcebus murinus
ENSMICG00000002512
I
0.000
ENSMICG00000004221
Microcebus murinus
ENSMICG00000004221
I
0.000
ENSMUSG00000097436
Mus musculus
ENSMUSG00000097436
I
0.000
ENSPMAG00000010239
Petromyzon marinus
ENSPMAG00000010239
I
0.000
ENSPSIG00000008536
Pelodiscus sinensis
ENSPSIG00000008536
I
0.000
ENSTGUG00000004229
Taeniopygia guttata
ENSTGUG00000004229
I
0.000
EVEC_0000238601
Enterobius vermicularis
EVEC_0000238601
I
0.000
e_gw.814.10.1
Branchiostoma floridae
e_gw.814.10.1
I
0.000
fgenesh2_pg.scaffold_205000001
Branchiostoma floridae
fgenesh2_pg.scaffold_205000001
I
0.000
GB40331
Apis mellifera
GB40331
I
0.000
GB42226
Apis mellifera
GB42226
I
0.000
GH24924
Drosophila grimshawi
FBgn0132379
I
0.000
GPLIN_000434400
Globodera pallida
GPLIN_000434400
I
0.000
GPLIN_000644800
Globodera pallida
GPLIN_000644800
I
0.000
GPLIN_001127900
Globodera pallida
GPLIN_001127900
I
0.000
Hba_14264
Heterorhabditis bacteriophora
Hba_14264
I
0.000
Hba_14752
Heterorhabditis bacteriophora
Hba_14752
I
0.000
HMEL006348
Heliconius melpomene
HMEL006348
I
0.000
HOXB3
Echinops telfairi
ENSETEG00000007761
I
0.000
HPLM_0000640301
Haemonchus placei
HPLM_0000640301
I
0.000
HPLM_0001802901
Haemonchus placei
HPLM_0001802901
I
0.000
ISCW002094
Ixodes scapularis
ISCW002094
I
0.000
ISCW017713
Ixodes scapularis
ISCW017713
I
0.000
LCUP010259
Lucilia cuprina
LCUP010259
I
0.000
LCUP012257
Lucilia cuprina
LCUP012257
I
0.000
LDEC001243
Leptinotarsa decemlineata
LDEC001243
I
0.000
LDEC010767
Leptinotarsa decemlineata
LDEC010767
I
0.000
lmx1a
Danio rerio
ENSDARG00000020354
I
0.000
MCINX001506
Melitaea cinxia
MCINX001506
I
0.000
MESCA002384
Megaselia scalaris
MESCA002384
I
0.000
MESCA003695
Megaselia scalaris
MESCA003695
I
0.000
MESCA012524
Megaselia scalaris
MESCA012524
I
0.000
MhA1_Contig290.frz3.gene10
Meloidogyne hapla
MhA1_Contig290.frz3.gene10
I
0.000
ML145813a
Mnemiopsis leidyi
ML145813a
I
0.000
nAv.1.0.1.g02632
Acanthocheilonema viteae
nAv.1.0.1.g02632
I
0.000
NBR_0000086401
Nippostrongylus brasiliensis
NBR_0000086401
I
0.000
nDi.2.2.2.g11780
Dirofilaria immitis
nDi.2.2.2.g11780
I
0.000
NEMVEDRAFT_v1g81249
Nematostella vectensis
NEMVEDRAFT_v1g81249
I
0.000
nOo.2.0.1.g02038
Onchocerca ochengi
nOo.2.0.1.g02038
I
0.000
OESDEN_08182
Oesophagostomum dentatum
OESDEN_08182
I
0.000
OFLC_0001568201
Onchocerca flexuosa
OFLC_0001568201
I
0.000
Otx2
Mus musculus
ENSMUSG00000021848
D
0.000
PEQ_0000511901
Parascaris equorum
PEQ_0000511901
I
0.000
PITX1
Homo sapiens
ENSG00000069011
D
0.000
Pitx1
Mus musculus
ENSMUSG00000021506
D
0.000
Pitx3
Mus musculus
ENSMUSG00000025229
D
0.000
PXEA_0000709901
Protopolystoma xenopodis
PXEA_0000709901
I
0.000
PXEA_0000830701
Protopolystoma xenopodis
PXEA_0000830701
I
0.000
Rhox9
Mus musculus
ENSMUSG00000068048
I
0.000
RPRC011667
Rhodnius prolixus
RPRC011667
I
0.000
SBAD_0000661201
Soboliphyme baturini
SBAD_0000661201
I
0.000
SCUD_0000012401
Schistosoma curassoni
SCUD_0000012401
I
0.000
SCUD_0001148701
Schistosoma curassoni
SCUD_0001148701
I
0.000
SCUD_0002251201
Schistosoma curassoni
SCUD_0002251201
I
0.000
SINV23302
Solenopsis invicta
SINV23302
I
0.000
Sjc_0039470
Schistosoma japonicum
Sjc_0039470
I
0.000
Sjc_0051960
Schistosoma japonicum
Sjc_0051960
I
0.000
Sjc_0075360
Schistosoma japonicum
Sjc_0075360
I
0.000
Smp_150810
Schistosoma mansoni
Smp_150810
I
0.000
SMTD_0000630101
Schistosoma mattheei
SMTD_0000630101
I
0.000
SMTD_0001421101
Schistosoma mattheei
SMTD_0001421101
I
0.000
SNAPOd2T00009387001
Oikopleura dioica
SNAPOd2T00009387001
I
0.000
SNAPOd2T00020544001
Oikopleura dioica
SNAPOd2T00020544001
I
0.000
SPER_0003668801
Spirometra erinaceieuropaei
SPER_0003668801
I
0.000
SROB_0000845601
Schistosoma rodhaini
SROB_0000845601
I
0.000
SROB_0001170301
Schistosoma rodhaini
SROB_0001170301
I
0.000
TCNE_0000805901
Toxocara canis
TCNE_0000805901
I
0.000
TELCIR_15720
Teladorsagia circumcincta
TELCIR_15720
I
0.000
TMUE_s0047002700
Trichuris muris
TMUE_s0047002700
I
0.000
TMUE_s0096002400
Trichuris muris
TMUE_s0096002400
I
0.000
TRE_0000552801
Trichobilharzia regenti
TRE_0000552801
I
0.000
TRE_0001706901
Trichobilharzia regenti
TRE_0001706901
I
0.000