LLOJ008518 (Lutzomyia longipalpis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LLOJ008518 T232530_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.820 0.652
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.820 0.652
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.820 0.652
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.820 0.652
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.820 0.652
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.820 0.652
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.820 0.652
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.820 0.652
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.820 0.652
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.718 0.413
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.718 0.413
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.718 0.413
CG32532
M03874_2.00 		Drosophila melanogaster
NTAAYBNVRTTAN
NTAAYBNVRTTAN		 SELEX
Nitta et al.(2015)
CG32532_1 		0.377 1.000
CG32532
M06547_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0179.1 		0.377 1.000
CG32532
M06370_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
CG32532_Cell_FBgn0052532 		0.377 1.000
CG32532
M06371_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG32532_SOLEXA_FBgn0052532 		0.377 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LLOJ008518-PA Homeodomain 178 223

Links

Other Homeodomain family TFs
Other Lutzomyia longipalpis TFs

1270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008266 Aedes aegypti AAEL008266 I 0.000
BGLB010522 Biomphalaria glabrata BGLB010522 I 0.000
ENSTSYG00000014223 Tarsius syrichta ENSTSYG00000014223 I 0.000
estExt_fgenesh2_pg.C_600126 Branchiostoma floridae estExt_fgenesh2_pg.C_600126 I 0.000
LotgiG100387 Lottia gigantea LotgiG100387 I 0.000
LotgiG80535 Lottia gigantea LotgiG80535 I 0.000
LotgiG80580 Lottia gigantea LotgiG80580 I 0.000
NEMVEDRAFT_v1g150808 Nematostella vectensis NEMVEDRAFT_v1g150808 I 0.000
PHOX2B Loxodonta africana ENSLAFG00000022070 I 0.000
RSKR_0000220300 Rhabditophanes kr3021 RSKR_0000220300 I 0.000
Sakowv30013777m.g Saccoglossus kowalevskii Sakowv30013777m.g I 0.000
sebox Xenopus tropicalis XB-GENE-853158 I 0.000
SPU_012631 Strongylocentrotus purpuratus SPU_012631 I 0.000
ZFHX2 Homo sapiens ENSG00000136367 D 0.000