ASU_09226 (Ascaris suum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ASU_09226 T233164_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.800 0.630
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.800 0.630
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.800 0.630
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.800 0.630
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.800 0.630
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.800 0.630
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.800 0.630
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.800 0.630
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.800 0.630
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.723 0.413
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.723 0.413
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.723 0.413
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_09226 Homeodomain 52 97

Links

Other Homeodomain family TFs
Other Ascaris suum TFs

1239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA030019 Oryza indica BGIOSGA030019 N 0.000
OB09G13350 Oryza brachyantha OB09G13350 N 0.000
OBART09G04870 Oryza barthii OBART09G04870 N 0.000
OGLUM09G05680 Oryza glumaepatula OGLUM09G05680 N 0.000
OLONG_021495 Oryza longistaminata OLONG_021495 N 0.000
OMERI09G04080 Oryza meridionalis OMERI09G04080 N 0.000
ONIVA01G05270 Oryza nivara ONIVA01G05270 N 0.000
OPUNC09G04390 Oryza punctata OPUNC09G04390 N 0.000
ORGLA09G0036000 Oryza glaberrima ORGLA09G0036000 N 0.000
OS09G0309700 Oryza sativa OS09G0309700 N 0.000
Si037209m.g Setaria italica Si037209m.g N 0.000