ASU_11785 (Ascaris suum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ASU_11785 T233169_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.751 0.413
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.751 0.413
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.751 0.413
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.751 0.413
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.751 0.413
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.751 0.413
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.751 0.413
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.751 0.413
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.751 0.413
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.662 0.239
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.662 0.239
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.662 0.239
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_11785 Homeodomain 64 109

Links

Other Homeodomain family TFs
Other Ascaris suum TFs

1226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m011066 Ricinus communis 30190.m011066 I 0.000
AMTR_s00018p00250840 Amborella trichopoda AMTR_s00018p00250840 N 0.000
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I 0.000
Aquca_122_00004 Aquilegia coerulea Aquca_122_00004 N 0.000
AtGRF7 Vitis vinifera VIT_16s0098g01080 N 0.000
BGIOSGA025662 Oryza indica BGIOSGA025662 N 0.000
Bra005268 Brassica rapa Bra005268 N 0.000
BRADI1G28400 Brachypodium distachyon BRADI1G28400 N 0.000
BRADI2G14320 Brachypodium distachyon BRADI2G14320 N 0.000
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I 0.000
Ca_04035 Cicer arietinum Ca_04035 N 0.000
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I 0.000
Eucgr.A01534 Eucalyptus grandis Eucgr.A01534 N 0.000
evm.TU.supercontig_3.145 Carica papaya evm.TU.supercontig_3.145 N 0.000
F775_29935 Aegilops tauschii F775_29935 N 0.000
GLYMA04G40880 Glycine max GLYMA04G40880 N 0.000
GLYMA06G13960 Glycine max GLYMA06G13960 N 0.000
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I 0.000
Gorai.008G241800 Gossypium raimondii Gorai.008G241800 I 0.000
GRF11 Oryza sativa OS07G0467500 N 0.000
GRMZM2G004619 Zea mays GRMZM2G004619 N 0.000
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.000
GRMZM2G096709 Zea mays GRMZM2G096709 N 0.000
GRMZM5G893117 Zea mays GRMZM5G893117 I 0.000
GSMUA_Achr11G21590_001 Musa acuminata GSMUA_Achr11G21590_001 I 0.000
GSMUA_Achr5G20170_001 Musa acuminata GSMUA_Achr5G20170_001 I 0.000
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N 0.000
LPERR07G11440 Leersia perrieri LPERR07G11440 N 0.000
MLOC_70581 Hordeum vulgare MLOC_70581 N 0.000
OB02G35150 Oryza brachyantha OB02G35150 N 0.000
OB03G39940 Oryza brachyantha OB03G39940 I 0.000
OB07G19720 Oryza brachyantha OB07G19720 N 0.000
OBART07G13680 Oryza barthii OBART07G13680 N 0.000
OGLUM07G12780 Oryza glumaepatula OGLUM07G12780 N 0.000
OLONG_025015 Oryza longistaminata OLONG_025015 N 0.000
OMERI07G10850 Oryza meridionalis OMERI07G10850 N 0.000
OMERI08G17030 Oryza meridionalis OMERI08G17030 N 0.000
ONIVA07G11690 Oryza nivara ONIVA07G11690 N 0.000
OPUNC07G12320 Oryza punctata OPUNC07G12320 N 0.000
ORGLA07G0115500 Oryza glaberrima ORGLA07G0115500 N 0.000
ORUFI07G13880 Oryza rufipogon ORUFI07G13880 N 0.000
Pavir.Aa00919 Panicum virgatum Pavir.Aa00919 I 0.000
Pavir.Ba01449 Panicum virgatum Pavir.Ba01449 N 0.000
Pavir.Bb02610 Panicum virgatum Pavir.Bb02610 N 0.000
Pm005437 Prunus mume Pm005437 N 0.000
PRUPE_ppa019623mg Prunus persica PRUPE_ppa019623mg N 0.000
Sb02g032860 Sorghum bicolor Sb02g032860 N 0.000
TCM_016120 Theobroma cacao TCM_016120 I 0.000
Traes_2AS_CA4D79100 Triticum aestivum Traes_2AS_CA4D79100 N 0.000
Traes_2BS_E3CBE0B73 Triticum aestivum Traes_2BS_E3CBE0B73 N 0.000
Traes_2DL_243DA9D84 Triticum aestivum Traes_2DL_243DA9D84 N 0.000
Traes_6BL_7462E6F9B Triticum aestivum Traes_6BL_7462E6F9B I 0.000
TRIUR3_26160 Triticum urartu TRIUR3_26160 N 0.000