DME_0000147601 (Dracunculus medinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 DME_0000147601 T233688_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.767 0.442
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.767 0.442
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.767 0.442
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.717 0.395
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.717 0.395
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.717 0.395
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.717 0.395
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.717 0.395
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.717 0.395
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.717 0.395
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.717 0.395
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.717 0.395
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DME_0000147601-mRNA-1 Homeodomain 188 230

Links

Other Homeodomain family TFs
Other Dracunculus medinensis TFs

1237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BOTBODRAFT_483871 Botryobasidium botryosum BOTBODRAFT_483871 I 0.000
GYMLUDRAFT_98786 Gymnopus luxurians GYMLUDRAFT_98786 I 0.000
J056_000139 Wallemia ichthyophaga J056_000139 I 0.000
M407DRAFT_24843 Tulasnella calospora M407DRAFT_24843 I 0.000
PGTG_18397 Puccinia graminis PGTG_18397 I 0.000
PHLGIDRAFT_391785 Phlebiopsis gigantea PHLGIDRAFT_391785 I 0.000
PLEOSDRAFT_1106452 Pleurotus ostreatus PLEOSDRAFT_1106452 N 0.000
PMAA_038720 Talaromyces marneffei PMAA_038720 N 0.000
PMAA_038720 Penicillium marneffei PMAA_038720 N 0.000
RHTO_02396 Rhodosporidium toruloides RHTO_02396 I 0.000