CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ECPE_0001051401
(
Echinostoma caproni
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
ECPE_0001051401
T233821_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ECPE_0001051401-mRNA-1
Homeodomain
421
477
RRSRTRLSEAQLAVLRSYFDINNSPCEEKMAEICLKTGLPGKVVKHWFRNTLFKERQ
ECPE_0001051401-mRNA-1
Homeodomain
875
931
RRNRTSITALQSRCMQAIYAHHKTPSVHECDRLGGMIGLTRRVVQVWFQNQRAKEKK
Links
Other
Homeodomain
family TFs
Other
Echinostoma caproni
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BTMF_0000333901
Brugia timori
BTMF_0000333901
N
0.666
csin104974
Clonorchis sinensis
csin104974
N
0.843
DILT_0000323001
Diphyllobothrium latum
DILT_0000323001
N
0.646
NBR_0000077301
Nippostrongylus brasiliensis
NBR_0000077301
N
0.647
SCUD_0001254201
Schistosoma curassoni
SCUD_0001254201
N
0.828
SMRZ_0001875501
Schistosoma margrebowiei
SMRZ_0001875501
N
0.828
SMU15004068
Schmidtea mediterranea
SMU15004068
N
0.711
T265_11578
Opisthorchis viverrini
T265_11578
N
0.843