GPLIN_000835700 (Globodera pallida)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 GPLIN_000835700 T234045_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rhox6
M00397_2.00 		Mus musculus
NTAAYNMN
NKNRTTAN		 PBM
Berger et al.(2008)
Rhox6_4251 		0.600 0.436
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000835700 Homeodomain 1 55

Links

Other Homeodomain family TFs
Other Globodera pallida TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSMUSG00000097200 Mus musculus ENSMUSG00000097200 I 0.600
Rhox6 Mus musculus ENSMUSG00000006200 D 0.600