HmN_000190500 (Hymenolepis microstoma)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HmN_000190500 T234291_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nkx6-1
M00466_2.00 		Mus musculus
NDTDATNRN
NYNATHAHN		 PBM
Berger et al.(2008)
Nkx6-1_2825 		0.855 0.930
HGTX
M03869_2.00 		Drosophila melanogaster
DTAATKRN
NYMATTAH		 SELEX
Nitta et al.(2015)
HGTX_1 		0.855 0.930
HGTX
M03870_2.00 		Drosophila melanogaster
DTAATKRN
NYMATTAH		 SELEX
Nitta et al.(2015)
HGTX_2 		0.855 0.930
HGTX
M06542_2.00 		Drosophila melanogaster
DTAATKA
TMATTAH		 B1H
Mathelier et al.(2014)
MA0191.1 		0.855 0.930
HGTX
M06360_2.00 		Drosophila melanogaster
DDTAATKA
TMATTAHH		 B1H
Zhu et al.(2011)
Hgtx_Cell_FBgn0040318 		0.855 0.930
HGTX
M06361_2.00 		Drosophila melanogaster
NWTAATKA
TMATTAWN		 B1H
Zhu et al.(2011)
Hgtx_SOLEXA_FBgn0040318 		0.855 0.930
NKX6-1
M09151_2.00 		Homo sapiens
RAHWRATKDSNWWWTRATD
HATYAWWWNSHMATYWDTY		 Misc
Kulakovskiy et al.(2013)
NKX61_HUMAN.H11MO.0.B 		0.855 0.930
Nkx6-1
M09200_2.00 		Mus musculus
HNWRATKDNHWWWTRATDR
YHATYAWWWDNHMATYWND		 Misc
Kulakovskiy et al.(2013)
NKX61_MOUSE.H11MO.0.A 		0.855 0.930
Nkx6-1
M09573_2.00 		Mus musculus
NDTAATKR
YMATTAHN		 Misc
Heinz et al.(2010)
Islet-Nkx6.1_GSE40975 		0.855 0.930
NKX6-1
M10718_2.00 		Homo sapiens
HWTTTAATKGRWT
AWYCMATTAAAWD		 Transfac
Matys et al.(2006)
V$NKX61_01 		0.855 0.930
NKX6-1
M10719_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX61_08 		0.855 0.930
Nkx6-3
M00522_2.00 		Mus musculus
NDYDATNRN
NYNATHRHN		 PBM
Berger et al.(2008)
Nkx6-3_3446 		0.855 0.895
NKX6-3
M05242_2.00 		Homo sapiens
NWTAATGRB
VYCATTAWN		 SELEX
Yin et al.(2017)
NKX6-3_eDBD_HT-SELEX 		0.855 0.895
NKX6-3
M05243_2.00 		Homo sapiens
DWTAATGRB
VYCATTAWH		 SELEX
Yin et al.(2017)
NKX6-3_eDBD_Methyl-HT-SELEX 		0.855 0.895
NKX6-2
M05184_2.00 		Homo sapiens
DTAATTRN
NYAATTAH		 SELEX
Yin et al.(2017)
NKX6-2_eDBD_HT-SELEX 		0.846 0.912
NKX6-2
M05186_2.00 		Homo sapiens
WTAATKAB
VTMATTAW		 SELEX
Yin et al.(2017)
NKX6-2_FL_HT-SELEX 		0.846 0.912
NKX6-2
M10711_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX62_Q2 		0.846 0.912
NKX6-2
M05185_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
NKX6-2_eDBD_Methyl-HT-SELEX 		0.846 0.912
NKX6-2
M05187_2.00 		Homo sapiens
WTAATKAB
VTMATTAW		 SELEX
Yin et al.(2017)
NKX6-2_FL_Methyl-HT-SELEX 		0.846 0.912
CBG20882
M01244_2.00 		Caenorhabditis briggsae
NDHDATDRN
NYHATHDHN		 PBM
Lambert et al.(2019)
pTH11477 		0.811 0.754
Q0N4H9_NEMVE
M02165_2.00 		Nematostella vectensis
NNYRWWNNN
NNNWWYRNN		 PBM
Weirauch et al.(2014)
pTH6101 		0.685 0.561
NEMVEDRAFT_v1g129868
M02146_2.00 		Nematostella vectensis
NYRAWNDNN
NNHNWTYRN		 PBM
Weirauch et al.(2014)
pTH5749 		0.679 0.561
NK7.1
M03847_2.00 		Drosophila melanogaster
VTTAAAYGDTD
HAHCRTTTAAB		 SELEX
Nitta et al.(2015)
NK7.1_1 		0.629 0.632
NK7.1
M03848_2.00 		Drosophila melanogaster
NSTTAATTGVY
RBCAATTAASN		 SELEX
Nitta et al.(2015)
NK7.1_2 		0.629 0.632
NK7.1
M06524_2.00 		Drosophila melanogaster
TTAATDR
YHATTAA		 B1H
Mathelier et al.(2014)
MA0196.1 		0.629 0.632
NK7.1
M06323_2.00 		Drosophila melanogaster
NTTAATDR
YHATTAAN		 B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321 		0.629 0.632
NK7.1
M06324_2.00 		Drosophila melanogaster
YTAATDR
YHATTAR		 B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321 		0.629 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000190500 Homeodomain 312 368

Links

Other Homeodomain family TFs
Other Hymenolepis microstoma TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_05211 Cladophialophora psammophila A1O5_05211 N 0.000
A1O9_00991 Exophiala aquamarina A1O9_00991 N 0.000
ACRE_069230 Acremonium chrysogenum ACRE_069230 N 0.000
BBA_08510 Beauveria bassiana BBA_08510 N 0.000
CADANGAG00001928 Aspergillus niger CADANGAG00001928 N 0.000
CADANGAG00006610 Aspergillus niger CADANGAG00006610 N 0.000
CCM_04496 Cordyceps militaris CCM_04496 N 0.000
CFIO01_05805 Colletotrichum fioriniae CFIO01_05805 N 0.000
CFIO01_05872 Colletotrichum fioriniae CFIO01_05872 N 0.000
CGGC5_11092 Colletotrichum gloeosporioides CGGC5_11092 N 0.000
CH063_00115 Colletotrichum higginsianum CH063_00115 N 0.000
CH063_13215 Colletotrichum higginsianum CH063_13215 N 0.000
COCC4DRAFT_64454 Bipolaris maydis COCC4DRAFT_64454 N 0.000
COCMIDRAFT_6077 Bipolaris oryzae COCMIDRAFT_6077 N 0.000
CSUB01_08465 Colletotrichum sublineola CSUB01_08465 N 0.000
CSUB01_10231 Colletotrichum sublineola CSUB01_10231 N 0.000
estExt_fgenesh1_pg.C_240014 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_240014 N 0.000
e_gw1.00815.93.1 Aspergillus carbonarius e_gw1.00815.93.1 N 0.000
e_gw1.34.5.1 Cochliobolus heterostrophus C5 e_gw1.34.5.1 N 0.000
F503_02724 Ophiostoma piceae uamh F503_02724 N 0.000
FFUJ_14523 Fusarium fujikuroi FFUJ_14523 N 0.000
fgenesh1_pg.00082_#_23 Aspergillus carbonarius fgenesh1_pg.00082_#_23 N 0.000
fgenesh1_pg.C_scaffold_9000410 Cryphonectria parasitica fgenesh1_pg.C_scaffold_9000410 N 0.000
FOXG_02565 Fusarium oxysporum FOXG_02565 N 0.000
gw1.00083.300.1 Aspergillus carbonarius gw1.00083.300.1 N 0.000
gw1.00643.3.1 Aspergillus carbonarius gw1.00643.3.1 N 0.000
HMPREF1120_04133 Exophiala dermatitidis HMPREF1120_04133 N 0.000
HMPREF1624_08182 Sporothrix schenckii HMPREF1624_08182 N 0.000
LEMA_P104170.1 Leptosphaeria maculans LEMA_P104170.1 N 0.000
M437DRAFT_47167 Aureobasidium melanogenum M437DRAFT_47167 N 0.000
MANI_026073 Metarhizium anisopliae MANI_026073 N 0.000
MBM_01548 Marssonina brunnea MBM_01548 N 0.000
MBM_08217 Marssonina brunnea MBM_08217 N 0.000
MBR_08937 Metarhizium brunneum MBR_08937 N 0.000
MCYG_00717 Microsporum canis MCYG_00717 N 0.000
MCYG_08710 Microsporum canis MCYG_08710 N 0.000
MCYG_08710 Arthroderma otae MCYG_08710 N 0.000
OIDMADRAFT_120194 Oidiodendron maius OIDMADRAFT_120194 N 0.000
OIDMADRAFT_193465 Oidiodendron maius OIDMADRAFT_193465 N 0.000
PEX1_051210 Penicillium expansum PEX1_051210 N 0.000
PMAA_001430 Penicillium marneffei PMAA_001430 N 0.000
PMAA_001430 Talaromyces marneffei PMAA_001430 N 0.000
PV06_05937 Exophiala oligosperma PV06_05937 N 0.000
PV08_00187 Exophiala spinifera PV08_00187 N 0.000
PV11_07373 Exophiala sideris PV11_07373 N 0.000
PVAR5_1141 Byssochlamys spectabilis PVAR5_1141 N 0.000
S40285_05664 Stachybotrys chlorohalonata S40285_05664 N 0.000
S40288_04224 Stachybotrys chartarum S40288_04224 N 0.000
SBOR_2893 Sclerotinia borealis SBOR_2893 N 0.000
SBOR_5781 Sclerotinia borealis SBOR_5781 N 0.000
SS1G_02247 Sclerotinia sclerotiorum SS1G_02247 N 0.000
TRIATDRAFT_281366 Trichoderma atroviride TRIATDRAFT_281366 N 0.000
TSTA_094290 Talaromyces stipitatus TSTA_094290 N 0.000
VDBG_02757 Verticillium alfalfae VDBG_02757 N 0.000
VDBG_02757 Verticillium albo atrum VDBG_02757 N 0.000
X797_005153 Metarhizium robertsii X797_005153 N 0.000
Z517_00801 Fonsecaea pedrosoi Z517_00801 N 0.000
Z518_08432 Rhinocladiella mackenziei Z518_08432 N 0.000