HPBE_0002264401 (Heligmosomoides bakeri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HPBE_0002264401 T234424_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.763 0.467
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.763 0.467
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.763 0.467
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.701 0.378
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.701 0.378
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.701 0.378
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.701 0.378
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.701 0.378
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.701 0.378
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.701 0.378
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.701 0.378
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.701 0.378
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0002264401-mRNA-1 Homeodomain 30 74

Links

Other Homeodomain family TFs
Other Heligmosomoides bakeri TFs

1234 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_00440 Capronia coronata A1O1_00440 I 0.000
A1O5_03789 Cladophialophora psammophila A1O5_03789 I 0.000
A1O7_00422 Cladophialophora yegresii A1O7_00422 I 0.000
A1O9_01459 Exophiala aquamarina A1O9_01459 I 0.000
ACRE_042290 Acremonium chrysogenum ACRE_042290 N 0.000
BAUCODRAFT_119725 Baudoinia compniacensis BAUCODRAFT_119725 I 0.000
BBA_00362 Beauveria bassiana BBA_00362 N 0.000
Bcin01g06300 Botrytis cinerea Bcin01g06300 I 0.000
BDDG_00695 Blastomyces dermatitidis BDDG_00695 I 0.000
BGHDH14_bgh02178 Blumeria graminis BGHDH14_bgh02178 I 0.000
CFIO01_12884 Colletotrichum fioriniae CFIO01_12884 I 0.000
CGGC5_6423 Colletotrichum gloeosporioides CGGC5_6423 I 0.000
CH063_10875 Colletotrichum higginsianum CH063_10875 I 0.000
CHGG_05934 Chaetomium globosum CHGG_05934 I 0.000
CIMG_01041 Coccidioides immitis CIMG_01041 I 0.000
Cob_08038 Colletotrichum orbiculare Cob_08038 I 0.000
COCC4DRAFT_62452 Bipolaris maydis COCC4DRAFT_62452 I 0.000
COCCADRAFT_21472 Bipolaris zeicola COCCADRAFT_21472 I 0.000
COCMIDRAFT_23818 Bipolaris oryzae COCMIDRAFT_23818 I 0.000
COCSADRAFT_276273 Bipolaris sorokiniana COCSADRAFT_276273 I 0.000
COCVIDRAFT_38721 Bipolaris victoriae COCVIDRAFT_38721 I 0.000
CPC735_053190 Coccidioides posadasii CPC735_053190 I 0.000
CPUR_06219 Claviceps purpurea CPUR_06219 N 0.000
DOTSEDRAFT_74982 Dothistroma septosporum DOTSEDRAFT_74982 I 0.000
estExt_fgenesh1_pg.C_50728 Cryphonectria parasitica estExt_fgenesh1_pg.C_50728 I 0.000
estExt_Genewise1Plus.C_100794 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_100794 I 0.000
estExt_Genewise1Plus.C_380118 Mycosphaerella fijiensis estExt_Genewise1Plus.C_380118 I 0.000
e_gw1.11.537.1 Mycosphaerella graminicola e_gw1.11.537.1 I 0.000
F503_02611 Ophiostoma piceae uamh F503_02611 I 0.000
FFUJ_01228 Fusarium fujikuroi FFUJ_01228 N 0.000
G647_00459 Cladophialophora carrionii G647_00459 I 0.000
GGTG_01991 Gaeumannomyces graminis GGTG_01991 I 0.000
GLRG_04444 Colletotrichum graminicola GLRG_04444 I 0.000
GMDG_04728 Pseudogymnoascus destructans GMDG_04728 I 0.000
HCBG_00900 Histoplasma capsulatum HCBG_00900 D 0.000
HMPREF1120_06024 Exophiala dermatitidis HMPREF1120_06024 I 0.000
HMPREF1541_05909 Cyphellophora europaea HMPREF1541_05909 I 0.000
LEMA_P095280.1 Leptosphaeria maculans LEMA_P095280.1 I 0.000
M437DRAFT_14468 Aureobasidium melanogenum M437DRAFT_14468 I 0.000
M438DRAFT_31288 Aureobasidium pullulans M438DRAFT_31288 I 0.000
MAPG_06349 Magnaporthe poae MAPG_06349 I 0.000
MBM_02592 Marssonina brunnea MBM_02592 I 0.000
MGG_04729 Magnaporthe oryzae MGG_04729 I 0.000
MGU_04950 Metarhizium guizhouense MGU_04950 N 0.000
MYCFIDRAFT_60981 Pseudocercospora fijiensis MYCFIDRAFT_60981 I 0.000
Mycgr3G49965 Zymoseptoria tritici Mycgr3G49965 I 0.000
MYCTH_77476 Myceliophthora thermophila MYCTH_77476 I 0.000
OCS_04756 Ophiocordyceps sinensis OCS_04756 N 0.000
OIDMADRAFT_117495 Oidiodendron maius OIDMADRAFT_117495 I 0.000
PAAG_01064 Paracoccidioides sp lutzii PAAG_01064 I 0.000
PABG_01647 Paracoccidioides brasiliensis PABG_01647 I 0.000
PFICI_02022 Pestalotiopsis fici PFICI_02022 I 0.000
PTT_18239 Pyrenophora teres PTT_18239 I 0.000
PV04_01647 Capronia semiimmersa PV04_01647 I 0.000
PV05_11407 Exophiala xenobiotica PV05_11407 I 0.000
PV06_03201 Exophiala oligosperma PV06_03201 I 0.000
PV07_10272 Cladophialophora immunda PV07_10272 I 0.000
PV08_05635 Exophiala spinifera PV08_05635 I 0.000
PV10_06256 Exophiala mesophila PV10_06256 I 0.000
PV11_07704 Exophiala sideris PV11_07704 I 0.000
SAPIO_CDS3166 Scedosporium apiospermum SAPIO_CDS3166 I 0.000
SBOR_1325 Sclerotinia borealis SBOR_1325 I 0.000
SEPMUDRAFT_52418 Sphaerulina musiva SEPMUDRAFT_52418 I 0.000
SETTUDRAFT_103803 Setosphaeria turcica SETTUDRAFT_103803 I 0.000
THITE_2112431 Thielavia terrestris THITE_2112431 I 0.000
TRIATDRAFT_297376 Trichoderma atroviride TRIATDRAFT_297376 N 0.000
TRIREDRAFT_56863 Trichoderma reesei TRIREDRAFT_56863 N 0.000
TRIVIDRAFT_173229 Trichoderma virens TRIVIDRAFT_173229 N 0.000
UCREL1_7924 Eutypa lata UCREL1_7924 I 0.000
UCRPA7_6713 Togninia minima UCRPA7_6713 I 0.000
V499_08165 Pseudogymnoascus pannorum V499_08165 I 0.000
VHEMI04007 Torrubiella hemipterigena VHEMI04007 N 0.000
X797_003701 Metarhizium robertsii X797_003701 N 0.000
Z517_08474 Fonsecaea pedrosoi Z517_08474 I 0.000
Z518_03932 Rhinocladiella mackenziei Z518_03932 I 0.000
Z519_03111 Cladophialophora bantiana Z519_03111 I 0.000