PEQ_0000620601 (Parascaris equorum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PEQ_0000620601 T235682_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.805 0.587
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.805 0.587
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.805 0.587
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.805 0.587
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.805 0.587
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.805 0.587
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.805 0.587
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.805 0.587
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.805 0.587
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.713 0.326
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.713 0.326
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.713 0.326
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PEQ_0000620601-mRNA-1 Homeodomain 58 103

Links

Other Homeodomain family TFs
Other Parascaris equorum TFs

1242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000009795 Chlorocebus sabaeus ENSCSAG00000009795 N 0.000
ENSMMUP00000002870 Macaca fascicularis ENSMMUP00000002870 N 0.000
ENSNLEG00000007550 Nomascus leucogenys ENSNLEG00000007550 N 0.000
ENSOPRG00000009950 Ochotona princeps ENSOPRG00000009950 N 0.000
ENSPPYG00000020561 Pongo abelii ENSPPYG00000020561 N 0.000
ENSPTRG00000022112 Pan troglodytes ENSPTRG00000022112 N 0.000
ENSPTRG00000041840 Pan troglodytes ENSPTRG00000041840 N 0.000
ENSTSYG00000007330 Tarsius syrichta ENSTSYG00000007330 N 0.000
ZMAT1 Callithrix jacchus ENSCJAG00000019724 N 0.000
ZMAT1 Homo sapiens ENSG00000166432 N 0.000
ZMAT1 Gorilla gorilla ENSGGOG00000025784 N 0.000
ZMAT1 Macaca mulatta ENSMMUG00000002151 N 0.000
ZMAT1 Otolemur garnettii ENSOGAG00000033601 N 0.000
ZMAT1 Tupaia belangeri ENSTBEG00000012967 N 0.000