Bra009515 (Brassica rapa)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bra009515 T239839_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.453 0.667
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.448 0.724
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.444 0.713
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.444 0.713
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.443 0.713
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.443 0.713
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.438 0.678
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.438 0.678
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.438 0.678
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.429 0.644
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.429 0.644
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.427 0.644
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.427 0.644
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.419 0.690
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.419 0.690
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.406 0.667
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.406 0.667
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.405 0.644
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.405 0.644
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009515.1-P HSF 14 104

Links

Other HSF family TFs
Other Brassica rapa TFs

1497 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013733 Aedes aegypti AAEL013733 I
AALB008673 Anopheles albimanus AALB008673 I
AARA004167 Anopheles arabiensis AARA004167 I
AATE000662 Anopheles atroparvus AATE000662 I
ACHR001589 Anopheles christyi ACHR001589 I
ACOM036537 Anopheles coluzzii ACOM036537 I
ACUA021045 Anopheles culicifacies ACUA021045 I
ADAC007293 Anopheles darlingi ADAC007293 I
ADIR010174 Anopheles dirus ADIR010174 I
AEPI001605 Anopheles epiroticus AEPI001605 I
AFAF011922 Anopheles farauti AFAF011922 I
AFUN003926 Anopheles funestus AFUN003926 I
AGAP013200 Anopheles gambiae AGAP013200 I
AMEC010318 Anopheles melas AMEC010318 I
AMEM016267 Anopheles merus AMEM016267 I
AMIN003630 Anopheles minimus AMIN003630 I
AQUA006811 Anopheles quadriannulatus AQUA006811 I
ASIS002625 Anopheles sinensis ASIS002625 I
ASTEI04154 Anopheles stephensi ASTEI04154 I
BGIBMGA004818 Bombyx mori BGIBMGA004818 D
CPIJ014460 Culex quinquefasciatus CPIJ014460 I
CpipJ_CPIJ014460 Culex pipiens CpipJ_CPIJ014460 I
dan Drosophila pseudoobscura FBgn0071288 I
dan Drosophila melanogaster FBgn0039286 I
danr Drosophila pseudoobscura FBgn0072483 I
danr Drosophila melanogaster FBgn0039283 D
GD21179 Drosophila simulans FBgn0192630 I
GD21183 Drosophila simulans FBgn0192634 I
GE23564 Drosophila yakuba FBgn0240740 I
GE23568 Drosophila yakuba FBgn0240744 I
GF17893 Drosophila ananassae FBgn0094911 I
GF17896 Drosophila ananassae FBgn0094914 I
GG11367 Drosophila erecta FBgn0103667 I
GG11370 Drosophila erecta FBgn0103670 I
GH18050 Drosophila grimshawi FBgn0125518 I
GH18053 Drosophila grimshawi FBgn0125521 I
GI23730 Drosophila mojavensis FBgn0146455 I
GI23731 Drosophila mojavensis FBgn0146456 I
GJ23601 Drosophila virilis FBgn0210698 I
GJ23602 Drosophila virilis FBgn0210699 I
GK13890 Drosophila willistoni FBgn0215897 I
GK13892 Drosophila willistoni FBgn0215899 I
GL21906 Drosophila persimilis FBgn0159499 I
GL21909 Drosophila persimilis FBgn0159502 I
GM17814 Drosophila sechellia FBgn0172721 I
HMEL015598 Heliconius melpomene HMEL015598 I
KGM_00077 Danaus plexippus KGM_00077 I
LCUP009760 Lucilia cuprina LCUP009760 I
LCUP015576 Lucilia cuprina LCUP015576 I
LLOJ006231 Lutzomyia longipalpis LLOJ006231 I
MCINX008551 Melitaea cinxia MCINX008551 I
MDOA003234 Musca domestica MDOA003234 I
MESCA003830 Megaselia scalaris MESCA003830 I
PPAI009086 Phlebotomus papatasi PPAI009086 I