CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hsf3
(
Mus musculus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
ENSMUSG00000045802
T240322_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hsf2
M09231_2.00
Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A
0.346
0.552
HSF1
M03329_2.00
Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC
SELEX
Jolma et al.(2013)
HSF1_1
0.345
0.573
HSF1
M03330_2.00
Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC
SELEX
Jolma et al.(2013)
HSF1_2
0.345
0.573
HSF1
M05523_2.00
Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX
0.345
0.573
HSF1
M05525_2.00
Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB
SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX
0.345
0.573
HSF1
M07977_2.00
Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC
ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford
0.345
0.573
HSF1
M09230_2.00
Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A
0.345
0.573
Hsf1
M09232_2.00
Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A
0.345
0.573
HSF1
M09592_2.00
Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN
Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477
0.345
0.573
Hsf1
M09593_2.00
Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000
0.345
0.573
HSF1
M10863_2.00
Homo sapiens
NGAAHNTTCY
RGAANDTTCN
Transfac
Matys et al.(2006)
V$HSF1_01
0.345
0.573
HSF1
M10864_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5_01
0.345
0.573
HSF1
M10865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5
0.345
0.573
HSF1
M10866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6_01
0.345
0.573
HSF1
M10867_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6
0.345
0.573
HSF1
M10868_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF_Q6
0.345
0.573
HSF1
M05524_2.00
Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY
SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX
0.345
0.573
HSF1
M05526_2.00
Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY
SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX
0.345
0.573
hsf2
M02248_2.00
Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN
PBM
Weirauch et al.(2014)
pTH9010
0.343
0.562
HSF2
M03324_2.00
Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC
SELEX
Jolma et al.(2013)
HSF2_1
0.341
0.552
HSF2
M02744_2.00
Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC
SELEX
Jolma et al.(2010)
HSF2_dimertrimer
0.341
0.552
HSF2
M05505_2.00
Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX
0.341
0.552
HSF2
M05507_2.00
Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB
SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX
0.341
0.552
HSF2
M09229_2.00
Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A
0.341
0.552
HSF2
M10859_2.00
Homo sapiens
VGAANNWTCB
VGAWNNTTCB
Transfac
Matys et al.(2006)
V$HSF2_01
0.341
0.552
HSF2
M10860_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF2_02
0.341
0.552
HSF2
M10861_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF2_Q6
0.341
0.552
HSF2
M05506_2.00
Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY
SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX
0.341
0.552
HSF2
M05508_2.00
Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY
SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX
0.341
0.552
HSF4
M03325_2.00
Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC
SELEX
Jolma et al.(2013)
HSF4_1
0.327
0.531
HSF4
M05509_2.00
Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB
SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX
0.327
0.531
HSF4
M10862_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF4_Q3
0.327
0.531
HSF4
M05510_2.00
Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY
SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX
0.327
0.531
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000052508
HSF
12
113
FLTKLWILVDDAVLDHVIRWGKDGHSFQIVNEETFAREVLPKYFKHNKITSFIRQLNMYGFRKVFALQTEKTSQENKISIEFQHPLFKRGEACLLANIKRKV
ENSMUSP00000114018
HSF
1
45
MYGFRKVFALQTEKTSQENKISIEFQHPLFKRGEACLLANIKRKV
ENSMUSP00000132248
HSF
18
102
SRRVQDGHSFQIVNEETFAREVLPKYFKHNKITSFIRQLNMYGFRKVFALQTEKTSQENKISIEFQHPLFKRGEACLLANIKRKV
ENSMUSP00000137314
HSF
1
45
MYGFRKVFALQTEKTSQENKISIEFQHPLFKRGEACLLANIKRKV
Links
Other
HSF
family TFs
Other
Mus musculus
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG021829.1
Alligator sinensis
Alligator_sinensis_CCG021829.1
I
AMAG_02759
Allomyces macrogynus
AMAG_02759
I
AMAG_06269
Allomyces macrogynus
AMAG_06269
I
AT-HSFB2A
Arabidopsis lyrata
scaffold_802851.1
I
Bo2g161830
Brassica oleracea
Bo2g161830
I
Bo3g108110
Brassica oleracea
Bo3g108110
I
Bostr.26833s0037
Boechera stricta
Bostr.26833s0037
I
Bra010049
Brassica rapa
Bra010049
I
Bra029291
Brassica rapa
Bra029291
I
Bra029292
Brassica rapa
Bra029292
I
Cagra.4553s0008
Capsella grandiflora
Cagra.4553s0008
I
CapteG130381
Capitella teleta
CapteG130381
I
0.327
Carubv10026734m.g
Capsella rubella
Carubv10026734m.g
I
CGI_10007406
Crassostrea gigas
CGI_10007406
I
Cmyd_10013638
Chelonia mydas
Cmyd_10013638
I
CPUR_03965
Claviceps purpurea
CPUR_03965
I
DAPPUDRAFT_213340
Daphnia pulex
DAPPUDRAFT_213340
I
DEHA2A03608g
Debaryomyces hansenii
DEHA2A03608g
I
E5Q_05471
Mixia osmundae
E5Q_05471
I
ENSACAG00000013094
Anolis carolinensis
ENSACAG00000013094
I
ENSAMEG00000005847
Ailuropoda melanoleuca
ENSAMEG00000005847
I
0.345
ENSAMXG00000012942
Astyanax mexicanus
ENSAMXG00000012942
I
0.335
ENSAMXG00000020456
Astyanax mexicanus
ENSAMXG00000020456
I
ENSAPLG00000007598
Anas platyrhynchos
ENSAPLG00000007598
I
ENSCSAG00000008638
Chlorocebus sabaeus
ENSCSAG00000008638
I
0.345
ENSGMOG00000019339
Gadus morhua
ENSGMOG00000019339
I
ENSLACG00000013265
Latimeria chalumnae
ENSLACG00000013265
I
0.345
ENSLOCG00000007411
Lepisosteus oculatus
ENSLOCG00000007411
I
0.339
ENSLOCG00000007976
Lepisosteus oculatus
ENSLOCG00000007976
I
ENSMLUG00000002310
Myotis lucifugus
ENSMLUG00000002310
I
0.345
ENSMLUG00000015849
Myotis lucifugus
ENSMLUG00000015849
I
0.328
ENSMLUG00000029200
Myotis lucifugus
ENSMLUG00000029200
I
0.345
ENSMPUG00000006704
Mustela putorius furo
ENSMPUG00000006704
I
0.345
ENSOANG00000002419
Ornithorhynchus anatinus
ENSOANG00000002419
N
ENSOARG00000014186
Ovis aries
ENSOARG00000014186
I
0.341
ENSONIG00000010204
Oreochromis niloticus
ENSONIG00000010204
I
ENSONIG00000015330
Oreochromis niloticus
ENSONIG00000015330
I
0.341
ENSP00000332698-D1
Bos grunniens
ENSP00000332698-D1
I
0.341
ENSPANG00000005938
Papio anubis
ENSPANG00000005938
I
0.345
ENSPFOG00000004675
Poecilia formosa
ENSPFOG00000004675
I
ENSPPYG00000018969
Pongo abelii
ENSPPYG00000018969
I
0.345
ENSSHAG00000010769
Sarcophilus harrisii
ENSSHAG00000010769
I
ENSSTOG00000007173
Ictidomys tridecemlineatus
ENSSTOG00000007173
I
0.345
ENSTSYG00000006467
Tarsius syrichta
ENSTSYG00000006467
I
0.345
ENSXMAG00000001905
Xiphophorus maculatus
ENSXMAG00000001905
I
0.336
ENSXMAG00000005948
Xiphophorus maculatus
ENSXMAG00000005948
I
GNLVRS01_PISO0I05618g
Millerozyma farinosa
GNLVRS01_PISO0I05618g
I
GNLVRS01_PISO0J07423g
Millerozyma farinosa
GNLVRS01_PISO0J07423g
I
GSPATT00015260001
Paramecium tetraurelia
GSPATT00015260001
N
GSTUM_00004466001
Tuber melanosporum
GSTUM_00004466001
N
HMEL012502
Heliconius melpomene
HMEL012502
I
HPODL_00106
Ogataea parapolymorpha
HPODL_00106
I
HSF1
Anolis carolinensis
ENSACAG00000012604
I
0.347
HSF1
Bos taurus
ENSBTAG00000020751
I
0.341
HSF1
Canis familiaris
ENSCAFG00000001563
I
0.345
HSF1
Callithrix jacchus
ENSCJAG00000021431
I
0.336
HSF1
Cavia porcellus
ENSCPOG00000019305
I
0.345
hsf1
Danio rerio
ENSDARG00000008818
I
0.339
HSF1
Dasypus novemcinctus
ENSDNOG00000047071
I
0.343
Hsf1
Dipodomys ordii
ENSDORG00000002333
I
0.345
HSF1
Equus caballus
ENSECAG00000000621
I
0.339
HSF1
Echinops telfairi
ENSETEG00000002048
I
0.340
HSF1
Felis catus
ENSFCAG00000007722
I
0.345
HSF1
Homo sapiens
ENSG00000185122
D
0.345
hsf1
Gasterosteus aculeatus
ENSGACG00000010434
I
0.346
HSF1
Gorilla gorilla
ENSGGOG00000013602
I
0.345
HSF1
Loxodonta africana
ENSLAFG00000021374
I
0.345
HSF1
Macaca mulatta
ENSMMUG00000014728
I
0.345
HSF1
Monodelphis domestica
ENSMODG00000010663
I
0.347
Hsf1
Mus musculus
ENSMUSG00000022556
D
0.345
HSF1
Otolemur garnettii
ENSOGAG00000028708
I
0.341
HSF1
Ochotona princeps
ENSOPRG00000004863
I
0.339
hsf1
Oryzias latipes
ENSORLG00000001699
I
0.336
HSF1
Pteropus vampyrus
ENSPVAG00000009267
I
0.345
Hsf1
Rattus norvegicus
ENSRNOG00000021732
I
0.345
HSF1
Sus scrofa
ENSSSCG00000005917
I
0.340
hsf1
Tetraodon nigroviridis
ENSTNIG00000018157
I
0.339
hsf1
Takifugu rubripes
ENSTRUG00000000233
I
0.344
hsf1
Xenopus laevis
XB-GENE-997145
I
0.339
hsf1.S
Xenopus laevis
XB-GENE-997146
I
0.339
hsf4
Danio rerio
ENSDARG00000013251
I
hsf4
Gasterosteus aculeatus
ENSGACG00000013994
I
HSF4
Monodelphis domestica
ENSMODG00000006228
I
hsf4
Oryzias latipes
ENSORLG00000013768
I
HSFB2A
Arabidopsis thaliana
AT5G62020
D
KGM_01871
Danaus plexippus
KGM_01871
I
LELG_03593
Lodderomyces elongisporus
LELG_03593
I
LLOJ009750
Lutzomyia longipalpis
LLOJ009750
I
LotgiG214431
Lottia gigantea
LotgiG214431
I
MAC_00090
Metarhizium acridum
MAC_00090
I
MAJ_06076
Metarhizium majus
MAJ_06076
I
MAM_04055
Metarhizium album
MAM_04055
I
MANI_007878
Metarhizium anisopliae
MANI_007878
I
MBR_06838
Metarhizium brunneum
MBR_06838
I
MCINX000434
Melitaea cinxia
MCINX000434
I
MGU_04528
Metarhizium guizhouense
MGU_04528
I
Ogr12192
Ophisaurus gracilis
Ogr12192
I
PGTG_02256
Puccinia graminis
PGTG_02256
I
PGUG_00225
Candida guilliermondii
PGUG_00225
I
PGUG_00225
Meyerozyma guilliermondii
PGUG_00225
I
PV11_01928
Exophiala sideris
PV11_01928
I
Pvit_07213
Pogona vitticeps
Pvit_07213
I
Pvit_18730
Pogona vitticeps
Pvit_18730
I
0.336
RO3G_10499
Rhizopus oryzae
RO3G_10499
I
Sakowv30012471m.g
Saccoglossus kowalevskii
Sakowv30012471m.g
I
SBOR_3380
Sclerotinia borealis
SBOR_3380
N
SMAR008659
Strigamia maritima
SMAR008659
I
0.320
TBLA_0G02700
Tetrapisispora blattae
TBLA_0G02700
I
tetur02g00310
Tetranychus urticae
tetur02g00310
I
X797_000060
Metarhizium robertsii
X797_000060
I
XP_002937220
Xenopus tropicalis
XP_002937220
I
XP_002937261
Xenopus tropicalis
XP_002937261
I
0.334
XP_002937262
Xenopus tropicalis
XP_002937262
I
0.334
XP_002942927
Xenopus tropicalis
XP_002942927
I
0.339
YQE_02436
Dendroctonus ponderosae
YQE_02436
I