CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PredSwiss_CON2839.2
(
Pneumocystis carinii
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
PredSwiss_CON2839.2
T243476_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.336
0.479
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.334
0.469
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.334
0.469
HSF1
M00060_2.00
Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN
PBM
Badis et al.(2008)
HSF1_4530
0.333
0.469
HSF1
M07489_2.00
Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1
0.333
0.469
HSF1
M08577_2.00
Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA
Misc
DeBoer et al.(2011)
YGL073W_1461
0.333
0.469
HSF1
M08578_2.00
Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC
Misc
DeBoer et al.(2011)
YGL073W_411
0.333
0.469
HSF1
M08579_2.00
Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD
Misc
DeBoer et al.(2011)
YGL073W_476
0.333
0.469
HSF1
M08580_2.00
Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY
Misc
DeBoer et al.(2011)
YGL073W_615
0.333
0.469
HSF1
M10874_2.00
Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY
Transfac
Matys et al.(2006)
F$HSF_02
0.333
0.469
HSF1
M10875_2.00
Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_03
0.333
0.469
HSF1
M10876_2.00
Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_04
0.333
0.469
HSF1
M10877_2.00
Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN
Transfac
Matys et al.(2006)
F$HSF_05
0.333
0.469
HSF1
M10878_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HSF_Q6
0.333
0.469
ANIA_08035
M02247_2.00
Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN
PBM
Weirauch et al.(2014)
pTH8231
0.325
0.448
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.324
0.458
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.324
0.458
Hsf2
M09231_2.00
Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A
0.320
0.490
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PredSwiss_CON2839.2
HSF
33
135
FLNKLYNMVSDSASDSLIKWSDSGESFLVLRPEHVAKHILPRFFKHHNFSSFVRQLNMYGFHKVPHPQHGVLESDSPNEVLEFSNPNFLRDQPDLLCLVTRKK
Links
Other
HSF
family TFs
Other
Pneumocystis carinii
TFs
515 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAI70264
Xenopus laevis
AAI70264
N
Aan_R008628
Calypte anna
Aan_R008628
N
Aan_R012927
Calypte anna
Aan_R012927
N
Afo_R001804
Aptenodytes forsteri
Afo_R001804
N
Afo_R010888
Aptenodytes forsteri
Afo_R010888
N
Afo_R015783
Aptenodytes forsteri
Afo_R015783
N
Alligator_sinensis_CCG018588.1
Alligator sinensis
Alligator_sinensis_CCG018588.1
N
Brh_R002741
Buceros rhinoceros
Brh_R002741
N
Cflo_03590--XP_394358.3_APIME
Camponotus floridanus
Cflo_03590--XP_394358.3_APIME
N
ENSAMEG00000002048
Ailuropoda melanoleuca
ENSAMEG00000002048
N
ENSAMEG00000014764
Ailuropoda melanoleuca
ENSAMEG00000014764
N
ENSAMEG00000015014
Ailuropoda melanoleuca
ENSAMEG00000015014
I
ENSAMXG00000001873
Astyanax mexicanus
ENSAMXG00000001873
N
ENSAMXG00000002473
Astyanax mexicanus
ENSAMXG00000002473
N
ENSAMXG00000013383
Astyanax mexicanus
ENSAMXG00000013383
N
ENSAMXG00000013895
Astyanax mexicanus
ENSAMXG00000013895
N
ENSAPLG00000003822
Anas platyrhynchos
ENSAPLG00000003822
N
ENSAPLG00000007386
Anas platyrhynchos
ENSAPLG00000007386
N
ENSAPLG00000016052
Anas platyrhynchos
ENSAPLG00000016052
N
ENSBTAP00000004603-D1
Bos grunniens
ENSBTAP00000004603-D1
N
ENSBTAP00000038860-D1
Bos grunniens
ENSBTAP00000038860-D1
N
ENSCSAG00000006922
Chlorocebus sabaeus
ENSCSAG00000006922
N
ENSCSAG00000014731
Chlorocebus sabaeus
ENSCSAG00000014731
N
ENSCSAG00000016796
Chlorocebus sabaeus
ENSCSAG00000016796
N
ENSFALG00000002053
Ficedula albicollis
ENSFALG00000002053
N
ENSFALG00000010174
Ficedula albicollis
ENSFALG00000010174
N
ENSFALG00000010354
Ficedula albicollis
ENSFALG00000010354
N
ENSGACG00000013255
Gasterosteus aculeatus
ENSGACG00000013255
N
ENSGMOG00000006285
Gadus morhua
ENSGMOG00000006285
N
ENSGMOG00000012782
Gadus morhua
ENSGMOG00000012782
N
ENSLACG00000008399
Latimeria chalumnae
ENSLACG00000008399
I
ENSLACG00000014372
Latimeria chalumnae
ENSLACG00000014372
N
ENSLOCG00000005236
Lepisosteus oculatus
ENSLOCG00000005236
N
ENSLOCG00000005847
Lepisosteus oculatus
ENSLOCG00000005847
N
ENSLOCG00000017216
Lepisosteus oculatus
ENSLOCG00000017216
N
ENSMMUP00000012198
Macaca fascicularis
ENSMMUP00000012198
N
ENSMPUG00000006922
Mustela putorius furo
ENSMPUG00000006922
N
ENSMPUG00000008741
Mustela putorius furo
ENSMPUG00000008741
N
ENSMPUG00000012946
Mustela putorius furo
ENSMPUG00000012946
N
ENSNLEG00000000678
Nomascus leucogenys
ENSNLEG00000000678
N
ENSNLEG00000008466
Nomascus leucogenys
ENSNLEG00000008466
N
ENSNLEG00000010244
Nomascus leucogenys
ENSNLEG00000010244
N
ENSOANG00000009861
Ornithorhynchus anatinus
ENSOANG00000009861
N
ENSOARG00000007966
Ovis aries
ENSOARG00000007966
N
ENSOARG00000013407
Ovis aries
ENSOARG00000013407
N
ENSONIG00000000499
Oreochromis niloticus
ENSONIG00000000499
N
ENSONIG00000009529
Oreochromis niloticus
ENSONIG00000009529
N
ENSONIG00000011639
Oreochromis niloticus
ENSONIG00000011639
N
ENSONIG00000011665
Oreochromis niloticus
ENSONIG00000011665
N
ENSONIG00000018694
Oreochromis niloticus
ENSONIG00000018694
N
ENSP00000276480
Macaca fascicularis
ENSP00000276480
N
ENSP00000276480-D1
Bos grunniens
ENSP00000276480-D1
N
ENSP00000327465
Macaca fascicularis
ENSP00000327465
N
ENSPANG00000005639
Papio anubis
ENSPANG00000005639
N
ENSPANG00000005908
Papio anubis
ENSPANG00000005908
N
ENSPANG00000009233
Papio anubis
ENSPANG00000009233
N
ENSPFOG00000002613
Poecilia formosa
ENSPFOG00000002613
N
ENSPFOG00000005354
Poecilia formosa
ENSPFOG00000005354
N
ENSPFOG00000014046
Poecilia formosa
ENSPFOG00000014046
N
ENSPFOG00000016047
Poecilia formosa
ENSPFOG00000016047
N
ENSPFOG00000017045
Poecilia formosa
ENSPFOG00000017045
N
ENSPPYG00000011263
Pongo abelii
ENSPPYG00000011263
N
ENSPPYG00000012686
Pongo abelii
ENSPPYG00000012686
N
ENSPSIG00000005126
Pelodiscus sinensis
ENSPSIG00000005126
N
ENSPSIG00000010265
Pelodiscus sinensis
ENSPSIG00000010265
N
ENSPSIG00000011125
Pelodiscus sinensis
ENSPSIG00000011125
N
ENSSHAG00000012193
Sarcophilus harrisii
ENSSHAG00000012193
N
ENSSHAG00000015142
Sarcophilus harrisii
ENSSHAG00000015142
N
ENSSHAG00000015433
Sarcophilus harrisii
ENSSHAG00000015433
N
ENSSTOG00000001345
Ictidomys tridecemlineatus
ENSSTOG00000001345
N
ENSSTOG00000008133
Ictidomys tridecemlineatus
ENSSTOG00000008133
N
ENSSTOG00000016500
Ictidomys tridecemlineatus
ENSSTOG00000016500
N
ENSTGUG00000007315
Taeniopygia guttata
ENSTGUG00000007315
N
ENSTGUG00000012971
Taeniopygia guttata
ENSTGUG00000012971
N
ENSTNIG00000004354
Tetraodon nigroviridis
ENSTNIG00000004354
N
ENSTSYG00000006016
Tarsius syrichta
ENSTSYG00000006016
N
ENSTSYG00000008880
Tarsius syrichta
ENSTSYG00000008880
N
ENSTSYG00000010425
Tarsius syrichta
ENSTSYG00000010425
N
ENSXMAG00000002367
Xiphophorus maculatus
ENSXMAG00000002367
N
ENSXMAG00000004301
Xiphophorus maculatus
ENSXMAG00000004301
N
ENSXMAG00000012857
Xiphophorus maculatus
ENSXMAG00000012857
N
ENSXMAG00000018975
Xiphophorus maculatus
ENSXMAG00000018975
N
estExt_fgenesh2_pg.C_1230027
Branchiostoma floridae
estExt_fgenesh2_pg.C_1230027
N
GB48919
Apis mellifera
GB48919
N
Gfo_R002934
Geospiza fortis
Gfo_R002934
N
Gfo_R005271
Geospiza fortis
Gfo_R005271
N
Gfo_R012653
Geospiza fortis
Gfo_R012653
N
HMEL002385
Heliconius melpomene
HMEL002385
N
Hsal_01303--XP_394358.3_APIME
Harpegnathos saltator
Hsal_01303--XP_394358.3_APIME
N
L798_00492
Zootermopsis nevadensis
L798_00492
N
Myotis_brandtii_MYT1L_10020908
Myotis brandtii
Myotis_brandtii_MYT1L_10020908
N
Myotis_brandtii_MYT1_10023423
Myotis brandtii
Myotis_brandtii_MYT1_10023423
N
Myotis_brandtii_ST18_10012485
Myotis brandtii
Myotis_brandtii_ST18_10012485
N
MYT1
Anolis carolinensis
ENSACAG00000006249
N
MYT1
Bos taurus
ENSBTAG00000006352
N
MYT1
Canis familiaris
ENSCAFG00000013222
N
MYT1
Cavia porcellus
ENSCPOG00000006790
N
MYT1
Dasypus novemcinctus
ENSDNOG00000032037
N
Myt1
Dipodomys ordii
ENSDORG00000006425
N
MYT1
Equus caballus
ENSECAG00000013810
N
MYT1
Felis catus
ENSFCAG00000001189
N
MYT1
Homo sapiens
ENSG00000196132
N
MYT1
Gallus gallus
ENSGALG00000005932
N
MYT1
Gorilla gorilla
ENSGGOG00000006335
N
MYT1
Loxodonta africana
ENSLAFG00000022251
N
MYT1
Meleagris gallopavo
ENSMGAG00000006569
N
MYT1
Microcebus murinus
ENSMICG00000003327
N
MYT1
Myotis lucifugus
ENSMLUG00000007626
N
MYT1
Macaca mulatta
ENSMMUG00000002315
N
MYT1
Monodelphis domestica
ENSMODG00000017076
N
Myt1
Mus musculus
ENSMUSG00000010505
N
MYT1
Ornithorhynchus anatinus
ENSOANG00000004914
N
MYT1
Oryctolagus cuniculus
ENSOCUG00000024866
N
MYT1
Otolemur garnettii
ENSOGAG00000011473
N
MYT1
Pan troglodytes
ENSPTRG00000032477
N
MYT1
Pteropus vampyrus
ENSPVAG00000017398
N
Myt1
Rattus norvegicus
ENSRNOG00000017346
N
MYT1
Takifugu rubripes
ENSTRUG00000002124
N
MYT1
Tursiops truncatus
ENSTTRG00000013408
N
myt1.S
Xenopus laevis
XB-GENE-1009978
N
myt1a
Danio rerio
ENSDARG00000074030
N
myt1a
Oryzias latipes
ENSORLG00000020139
N
myt1a
Takifugu rubripes
ENSTRUG00000007068
N
myt1b
Danio rerio
ENSDARG00000102879
N
myt1b
Gasterosteus aculeatus
ENSGACG00000013224
N
myt1b
Oryzias latipes
ENSORLG00000002252
N
myt1b
Tetraodon nigroviridis
ENSTNIG00000003105
N
MYT1L
Anolis carolinensis
ENSACAG00000005667
N
MYT1L
Canis familiaris
ENSCAFG00000003240
N
MYT1L
Callithrix jacchus
ENSCJAG00000007286
N
MYT1L
Cavia porcellus
ENSCPOG00000013246
N
MYT1L
Dasypus novemcinctus
ENSDNOG00000037275
N
MYT1L
Equus caballus
ENSECAG00000014657
N
MYT1L
Felis catus
ENSFCAG00000013984
N
MYT1L
Homo sapiens
ENSG00000186487
I
MYT1L
Gallus gallus
ENSGALG00000016384
N
MYT1L
Gorilla gorilla
ENSGGOG00000026335
N
MYT1L
Loxodonta africana
ENSLAFG00000002751
N
MYT1L
Meleagris gallopavo
ENSMGAG00000013972
N
MYT1L
Myotis lucifugus
ENSMLUG00000012642
N
MYT1L
Macaca mulatta
ENSMMUG00000009310
I
MYT1L
Monodelphis domestica
ENSMODG00000014378
N
Myt1l
Mus musculus
ENSMUSG00000061911
N
MYT1L
Oryctolagus cuniculus
ENSOCUG00000016764
N
MYT1L
Otolemur garnettii
ENSOGAG00000010219
N
MYT1L
Ochotona princeps
ENSOPRG00000007706
N
MYT1L
Oryzias latipes
ENSORLG00000017852
N
MYT1L
Procavia capensis
ENSPCAG00000015124
N
MYT1L
Pan troglodytes
ENSPTRG00000011611
N
Myt1l
Rattus norvegicus
ENSRNOG00000004269
N
MYT1L
Sorex araneus
ENSSARG00000012319
N
MYT1L
Sus scrofa
ENSSSCG00000029334
N
MYT1L
Takifugu rubripes
ENSTRUG00000003414
N
MYT1L
Tursiops truncatus
ENSTTRG00000008589
N
myt1la
Danio rerio
ENSDARG00000008209
N
myt1la
Gasterosteus aculeatus
ENSGACG00000011952
N
myt1la
Oryzias latipes
ENSORLG00000018130
N
myt1la
Tetraodon nigroviridis
ENSTNIG00000010716
N
myt1la
Takifugu rubripes
ENSTRUG00000015790
N
NV11201
Nasonia vitripennis
NV11201
N
Ogr14932
Ophisaurus gracilis
Ogr14932
N
Pvit_03612
Pogona vitticeps
Pvit_03612
N
Pvit_15314
Pogona vitticeps
Pvit_15314
N
Sakowv30043989m.g
Saccoglossus kowalevskii
Sakowv30043989m.g
N
ST18
Anolis carolinensis
ENSACAG00000017961
N
ST18
Bos taurus
ENSBTAG00000005560
N
ST18
Canis familiaris
ENSCAFG00000006762
N
ST18
Choloepus hoffmanni
ENSCHOG00000010565
N
ST18
Callithrix jacchus
ENSCJAG00000014630
N
ST18
Cavia porcellus
ENSCPOG00000005486
N
ST18
Dasypus novemcinctus
ENSDNOG00000009682
N
St18
Dipodomys ordii
ENSDORG00000002635
N
ST18
Equus caballus
ENSECAG00000011546
N
ST18
Felis catus
ENSFCAG00000008556
N
ST18
Homo sapiens
ENSG00000147488
I
ST18
Gallus gallus
ENSGALG00000015254
N
ST18
Gorilla gorilla
ENSGGOG00000001223
N
ST18
Myotis lucifugus
ENSMLUG00000013211
N
ST18
Macaca mulatta
ENSMMUG00000008439
N
ST18
Monodelphis domestica
ENSMODG00000009635
N
St18
Mus musculus
ENSMUSG00000033740
N
ST18
Ornithorhynchus anatinus
ENSOANG00000007275
N
ST18
Oryctolagus cuniculus
ENSOCUG00000013284
N
ST18
Otolemur garnettii
ENSOGAG00000012050
N
ST18
Ochotona princeps
ENSOPRG00000001335
N
ST18
Pan troglodytes
ENSPTRG00000020245
N
ST18
Pteropus vampyrus
ENSPVAG00000013501
N
St18
Rattus norvegicus
ENSRNOG00000006200
N
ST18
Sus scrofa
ENSSSCG00000006266
N
ST18
Taeniopygia guttata
ENSTGUG00000010944
N
ST18
Tetraodon nigroviridis
ENSTNIG00000008501
N
ST18
Takifugu rubripes
ENSTRUG00000006078
N
ST18
Tursiops truncatus
ENSTTRG00000015387
N
Tal_R003131
Tyto alba
Tal_R003131
N
XP_002934158
Xenopus tropicalis
XP_002934158
N
XP_002936343
Xenopus tropicalis
XP_002936343
N
XP_002942428
Xenopus tropicalis
XP_002942428
N