IRF1 (Erinaceus europaeus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSEEUG00000013362 T244052_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF1
M08142_2.00 		Homo sapiens
RWANNGAAASYGAAASYRNNN
NNNYRSTTTCRSTTTCNNTWY		 ChIP-seq
Mathelier et al.(2014)
MA0050.2 		1.000 1.000
IRF1
M09233_2.00 		Homo sapiens
NRAANNGAAASWGAAASHRN
NYDSTTTCWSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A 		1.000 1.000
Irf1
M09242_2.00 		Mus musculus
VRAANNGAAASYGAAASYVN
NBRSTTTCRSTTTCNNTTYB		 Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A 		1.000 1.000
IRF1
M09594_2.00 		Homo sapiens
GAAASTGAAASY
RSTTTCASTTTC		 Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036 		1.000 1.000
IRF1
M10879_2.00 		Homo sapiens
SAAAASYGAAASY
RSTTTCRSTTTTS		 Transfac
Matys et al.(2006)
V$IRF1_01 		1.000 1.000
IRF1
M10880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_03 		1.000 1.000
IRF1
M10881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q5 		1.000 1.000
IRF1
M10882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q6 		1.000 1.000
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.771 0.771
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.771 0.771
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.771 0.771
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.771 0.771
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.771 0.771
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.771 0.771
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.771 0.771
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.771 0.771
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000012171 IRF 7 112

Links

Other IRF family TFs
Other Erinaceus europaeus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08709 Capronia coronata A1O1_08709 I
A1O3_08094 Capronia epimyces A1O3_08094 I
A1O5_04435 Cladophialophora psammophila A1O5_04435 I
A1O7_03387 Cladophialophora yegresii A1O7_03387 I
A1O9_03458 Exophiala aquamarina A1O9_03458 I
A1O9_12959 Exophiala aquamarina A1O9_12959 I
ARB_01992 Arthroderma benhamiae ARB_01992 I
Bcin09g01580 Botrytis cinerea Bcin09g01580 N
BDDG_07136 Blastomyces dermatitidis BDDG_07136 I
EPUS_04902 Endocarpon pusillum EPUS_04902 I
EV44_g6223 Erysiphe necator EV44_g6223 I
G647_04998 Cladophialophora carrionii G647_04998 I
GMDG_06896 Pseudogymnoascus destructans GMDG_06896 I
H072_5617 Dactylellina haptotyla H072_5617 I
H101_06341 Trichophyton interdigitale H101_06341 I
H102_07503 Trichophyton rubrum H102_07503 I
H105_07531 Trichophyton soudanense H105_07531 I
HCBG_05620 Histoplasma capsulatum HCBG_05620 D
HMPREF1541_04403 Cyphellophora europaea HMPREF1541_04403 I
MCYG_00576 Arthroderma otae MCYG_00576 I
MCYG_00576 Microsporum canis MCYG_00576 I
MGYG_01386 Microsporum gypseum MGYG_01386 I
PABG_06482 Paracoccidioides brasiliensis PABG_06482 I
PDE_03379 Penicillium oxalicum PDE_03379 I
PMAA_018530 Penicillium marneffei PMAA_018530 I
PMAA_018530 Talaromyces marneffei PMAA_018530 I
PV04_03585 Capronia semiimmersa PV04_03585 N
PV05_05708 Exophiala xenobiotica PV05_05708 I
PV06_02748 Exophiala oligosperma PV06_02748 I
PV07_06716 Cladophialophora immunda PV07_06716 I
PV08_11124 Exophiala spinifera PV08_11124 I
PV10_05482 Exophiala mesophila PV10_05482 I
PV11_00872 Exophiala sideris PV11_00872 I
S40288_07681 Stachybotrys chartarum S40288_07681 N
TEQG_05447 Trichophyton equinum TEQG_05447 I
TESG_05799 Trichophyton tonsurans TESG_05799 I
TSTA_026540 Talaromyces stipitatus TSTA_026540 I
V499_05047 Pseudogymnoascus pannorum V499_05047 I
VHEMI07137 Torrubiella hemipterigena VHEMI07137 I
Z517_10389 Fonsecaea pedrosoi Z517_10389 I
Z518_01320 Rhinocladiella mackenziei Z518_01320 I
Z519_02267 Cladophialophora bantiana Z519_02267 I