IRF8 (Gallus gallus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGALG00000005757 T244099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.971 0.971
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.971 0.971
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.971 0.971
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.971 0.971
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.971 0.971
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.971 0.971
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.971 0.971
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.971 0.971
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.971 0.971
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.971 0.971
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.808 0.808
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.808 0.808
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.808 0.808
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.808 0.808
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.808 0.808
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.808 0.808
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.808 0.808
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.808 0.808
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.808 0.808
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.808 0.808
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.808 0.808
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.808 0.808
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000009229 IRF 9 113

Links

Other IRF family TFs
Other Gallus gallus TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011702 Calypte anna Aan_R011702 N
Aan_R013281 Calypte anna Aan_R013281 N
Afo_R000657 Aptenodytes forsteri Afo_R000657 N
Afo_R010054 Aptenodytes forsteri Afo_R010054 N
BGLB010770 Biomphalaria glabrata BGLB010770 N
Brh_R003300 Buceros rhinoceros Brh_R003300 N
Brh_R008816 Buceros rhinoceros Brh_R008816 N
Brh_R012220 Buceros rhinoceros Brh_R012220 N
Cflo_07826--XP_624996.2_APIME Camponotus floridanus Cflo_07826--XP_624996.2_APIME N
CGOC_0000046201 Cylicostephanus goldi CGOC_0000046201 N
CLEC007919 Cimex lectularius CLEC007919 N
Cmyd_10006710 Chelonia mydas Cmyd_10006710 N
Cmyd_10014201 Chelonia mydas Cmyd_10014201 N
D917_03505 Trichinella nativa D917_03505 N
D918_08253 Trichuris suis D918_08253 N
D_00388 Schistosoma haematobium D_00388 N
EFV55313 Trichinella spiralis EFV55313 N
ENSAMEG00000018694 Ailuropoda melanoleuca ENSAMEG00000018694 N
ENSAMXG00000017686 Astyanax mexicanus ENSAMXG00000017686 N
ENSBTAP00000010868-D3 Bos grunniens ENSBTAP00000010868-D3 N
ENSMGAG00000006142 Meleagris gallopavo ENSMGAG00000006142 N
ENSMICG00000001025 Microcebus murinus ENSMICG00000001025 N
ENSMMUG00000000191 Macaca mulatta ENSMMUG00000000191 N
ENSMMUP00000032000 Macaca fascicularis ENSMMUP00000032000 N
ENSOANG00000008148 Ornithorhynchus anatinus ENSOANG00000008148 N
ENSOANG00000014925 Ornithorhynchus anatinus ENSOANG00000014925 N
ENSTNIG00000004331 Tetraodon nigroviridis ENSTNIG00000004331 N
EVEC_0000948101 Enterobius vermicularis EVEC_0000948101 N
Gfo_R003038 Geospiza fortis Gfo_R003038 N
Gfo_R007594 Geospiza fortis Gfo_R007594 N
GPUH_0000232301 Gongylonema pulchrum GPUH_0000232301 N
gw.66.125.1 Branchiostoma floridae gw.66.125.1 N
HDID_0000181401 Hymenolepis diminuta HDID_0000181401 N
HelroG65724 Helobdella robusta HelroG65724 N
HHAL003722-PA Halyomorpha halys HHAL003722-PA N
HPLM_0000364101 Haemonchus placei HPLM_0000364101 N
ISCW015625 Ixodes scapularis ISCW015625 N
L798_07539 Zootermopsis nevadensis L798_07539 N
MCOS_0000769201 Mesocestoides corti MCOS_0000769201 N
Myotis_brandtii_Onecut1_10025995 Myotis brandtii Myotis_brandtii_Onecut1_10025995 N
nRc.2.0.1.g06030 Romanomermis culicivorax nRc.2.0.1.g06030 N
Ocbimv22034216m.g Octopus bimaculoides Ocbimv22034216m.g N
Ogr01623 Ophisaurus gracilis Ogr01623 N
Ogr02782 Ophisaurus gracilis Ogr02782 N
Onecut3 Rattus norvegicus ENSRNOG00000059889 N
PEQ_0000468501 Parascaris equorum PEQ_0000468501 N
scaffold144-EXSNAP2012.48 Pristionchus exspectatus scaffold144-EXSNAP2012.48 N
SMRZ_0002529501 Schistosoma margrebowiei SMRZ_0002529501 N
SMTD_0000798901 Schistosoma mattheei SMTD_0000798901 N
SMUV_0001032901 Syphacia muris SMUV_0001032901 N
SROB_0000955701 Schistosoma rodhaini SROB_0000955701 N
Tal_R009878 Tyto alba Tal_R009878 N
Tal_R009917 Tyto alba Tal_R009917 N
TELCIR_12105 Teladorsagia circumcincta TELCIR_12105 N
TELCIR_14748 Teladorsagia circumcincta TELCIR_14748 N