irf4b (Oryzias latipes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSORLG00000012712 T244297_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.943 0.943
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.943 0.943
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.943 0.943
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.943 0.943
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.943 0.943
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.943 0.943
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.943 0.943
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.943 0.943
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.943 0.943
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.943 0.943
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.943 0.943
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.933 0.933
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.933 0.933
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.771 0.771
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.771 0.771
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.771 0.771
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.771 0.771
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.771 0.771
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.771 0.771
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.771 0.771
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.771 0.771
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.771 0.771
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000015927 IRF 17 122
ENSORLP00000015931 IRF 17 122
ENSORLP00000015933 IRF 17 122

Links

Other IRF family TFs
Other Oryzias latipes TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R014038 Calypte anna Aan_R014038 I 0.000
Afo_R007145 Aptenodytes forsteri Afo_R007145 I 0.000
Alligator_sinensis_CCG004455.1 Alligator sinensis Alligator_sinensis_CCG004455.1 I 0.000
Cmyd_10017689 Chelonia mydas Cmyd_10017689 I 0.000
ENSAMEG00000002016 Ailuropoda melanoleuca ENSAMEG00000002016 I 0.000
ENSCSAG00000009620 Chlorocebus sabaeus ENSCSAG00000009620 I 0.000
ENSFALG00000004331 Ficedula albicollis ENSFALG00000004331 I 0.000
ENSLACG00000000328 Latimeria chalumnae ENSLACG00000000328 I 0.000
ENSLOCG00000002626 Lepisosteus oculatus ENSLOCG00000002626 I 0.000
ENSMEUG00000000888 Macropus eugenii ENSMEUG00000000888 I 0.000
ENSMPUG00000015023 Mustela putorius furo ENSMPUG00000015023 I 0.000
ENSNLEG00000009797 Nomascus leucogenys ENSNLEG00000009797 I 0.000
ENSOARG00000003120 Ovis aries ENSOARG00000003120 I 0.000
ENSOPRG00000001061 Ochotona princeps ENSOPRG00000001061 I 0.000
ENSP00000204517 Macaca fascicularis ENSP00000204517 I 0.000
ENSP00000204517-D1 Bos grunniens ENSP00000204517-D1 I 0.000
ENSPANG00000010499 Papio anubis ENSPANG00000010499 I 0.000
ENSPPYG00000007054 Pongo abelii ENSPPYG00000007054 I 0.000
ENSPSIG00000009002 Pelodiscus sinensis ENSPSIG00000009002 I 0.000
ENSPVAG00000005418 Pteropus vampyrus ENSPVAG00000005418 I 0.000
ENSSHAG00000011487 Sarcophilus harrisii ENSSHAG00000011487 I 0.000
ENSSTOG00000028040 Ictidomys tridecemlineatus ENSSTOG00000028040 I 0.000
Myotis_brandtii_TFAP4_10028039 Myotis brandtii Myotis_brandtii_TFAP4_10028039 I 0.000
Ocbimv22002701m.g Octopus bimaculoides Ocbimv22002701m.g N 0.000
Ogr05167 Ophisaurus gracilis Ogr05167 I 0.000
Pvit_18996 Pogona vitticeps Pvit_18996 I 0.000
TFAP4 Cavia porcellus ENSCPOG00000004174 I 0.000
Tfap4 Rattus norvegicus ENSRNOG00000005227 I 0.000
TFAP4 Tupaia belangeri ENSTBEG00000014089 I 0.000
TFAP4 Tursiops truncatus ENSTTRG00000002710 I 0.000
TFAP4 Vicugna pacos ENSVPAG00000008001 I 0.000
tfap4 Xenopus tropicalis XB-GENE-999265 I 0.000
TFAP4 Callithrix jacchus ENSCJAG00000019756 I 0.000
TFAP4 Canis familiaris ENSCAFG00000019231 I 0.000
TFAP4 Bos taurus ENSBTAG00000033174 I 0.000
TFAP4 Felis catus ENSFCAG00000011227 I 0.000
TFAP4 Monodelphis domestica ENSMODG00000016377 I 0.000
TFAP4 Homo sapiens ENSG00000090447 D 0.000
TFAP4 Gorilla gorilla ENSGGOG00000000451 I 0.000
TFAP4 Echinops telfairi ENSETEG00000008634 I 0.000
TFAP4 Loxodonta africana ENSLAFG00000022341 I 0.000
TFAP4 Erinaceus europaeus ENSEEUG00000006004 I 0.000
TFAP4 Equus caballus ENSECAG00000022311 I 0.000
TFAP4 Meleagris gallopavo ENSMGAG00000009411 I 0.000
TFAP4 Myotis lucifugus ENSMLUG00000005725 I 0.000
TFAP4 Pan troglodytes ENSPTRG00000007713 I 0.000
Tfap4 Dipodomys ordii ENSDORG00000004656 I 0.000
Tfap4 Mus musculus ENSMUSG00000005718 D 0.000
TFAP4 Dasypus novemcinctus ENSDNOG00000039193 I 0.000
TFAP4 Ornithorhynchus anatinus ENSOANG00000019858 I 0.000
TFAP4 Anolis carolinensis ENSACAG00000016352 I 0.000
TFAP4 Oryctolagus cuniculus ENSOCUG00000024550 I 0.000
TFAP4 Otolemur garnettii ENSOGAG00000008955 I 0.000
TFAP4 Procavia capensis ENSPCAG00000011134 I 0.000