irf8 (Oryzias latipes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSORLG00000018216 T244300_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.885 0.885
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.885 0.885
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.885 0.885
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.885 0.885
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.885 0.885
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.885 0.885
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.885 0.885
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.885 0.885
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.885 0.885
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.865 0.865
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.769 0.769
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.769 0.769
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.769 0.769
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.769 0.769
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.769 0.769
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.769 0.769
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.769 0.769
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.769 0.769
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.769 0.769
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.769 0.769
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.769 0.769
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.769 0.769
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000022814 IRF 8 111

Links

Other IRF family TFs
Other Oryzias latipes TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001347 Aedes aegypti AAEL001347 N
AATE011073 Anopheles atroparvus AATE011073 N
AATE011230 Anopheles atroparvus AATE011230 N
ACEP15165 Atta cephalotes ACEP15165 N
ACHR000032 Anopheles christyi ACHR000032 N
ACHR010096 Anopheles christyi ACHR010096 N
ACOM033895 Anopheles coluzzii ACOM033895 N
ACUA000836 Anopheles culicifacies ACUA000836 N
ADAC008697 Anopheles darlingi ADAC008697 N
ADAC009393 Anopheles darlingi ADAC009393 N
AEPI009636 Anopheles epiroticus AEPI009636 N
AFAF002449 Anopheles farauti AFAF002449 N
AFAF002772 Anopheles farauti AFAF002772 N
AFUN010373 Anopheles funestus AFUN010373 N
AGAP012950 Anopheles gambiae AGAP012950 N
AMAM000172 Anopheles maculatus AMAM000172 N
AMEC000479 Anopheles melas AMEC000479 N
AMEC003904 Anopheles melas AMEC003904 N
AMEM008406 Anopheles merus AMEM008406 N
AMIN002198 Anopheles minimus AMIN002198 N
AQUA006477 Anopheles quadriannulatus AQUA006477 N
ASIS012990 Anopheles sinensis ASIS012990 N
BGIBMGA007797 Bombyx mori BGIBMGA007797 N
Cflo_10942--XP_001121936.1_APIME Camponotus floridanus Cflo_10942--XP_001121936.1_APIME N
CG4374 Drosophila melanogaster FBgn0039078 N
CLEC005025 Cimex lectularius CLEC005025 N
CLEC005028 Cimex lectularius CLEC005028 N
CPIJ015425 Culex quinquefasciatus CPIJ015425 N
CpipJ_CPIJ015425 Culex pipiens CpipJ_CPIJ015425 N
DAPPUDRAFT_9525 Daphnia pulex DAPPUDRAFT_9525 N
GA18142 Drosophila pseudoobscura FBgn0078150 N
GB52523 Apis mellifera GB52523 N
GD18382 Drosophila simulans FBgn0189909 N
GE23956 Drosophila yakuba FBgn0241098 N
GF18765 Drosophila ananassae FBgn0095782 N
GG12435 Drosophila erecta FBgn0104723 N
GH20801 Drosophila grimshawi FBgn0128264 N
GI10710 Drosophila mojavensis FBgn0133474 N
GJ23125 Drosophila virilis FBgn0210227 N
GK13158 Drosophila willistoni FBgn0215167 N
GL13850 Drosophila persimilis FBgn0151455 N
GM23566 Drosophila sechellia FBgn0178432 N
HHAL000145-PA Halyomorpha halys HHAL000145-PA N
HMEL006238 Heliconius melpomene HMEL006238 N
KGM_19023 Danaus plexippus KGM_19023 N
L798_13006 Zootermopsis nevadensis L798_13006 N
LCUP001485 Lucilia cuprina LCUP001485 N
LDEC003260 Leptinotarsa decemlineata LDEC003260 N
LLOJ002004 Lutzomyia longipalpis LLOJ002004 N
MCINX016666 Melitaea cinxia MCINX016666 N
MDOA009050 Musca domestica MDOA009050 N
NV22259 Nasonia vitripennis NV22259 N
PHUM535390 Pediculus humanus PHUM535390 N
PPAI008603 Phlebotomus papatasi PPAI008603 N
SINV21477 Solenopsis invicta SINV21477 N
TC013857 Tribolium castaneum TC013857 N
YQE_03596 Dendroctonus ponderosae YQE_03596 N