IRF8 (Procavia capensis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSPCAG00000004460 T244309_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.971 0.971
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.971 0.971
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.971 0.971
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.971 0.971
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.971 0.971
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.971 0.971
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.971 0.971
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.971 0.971
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.971 0.971
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.971 0.971
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.808 0.808
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.808 0.808
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.808 0.808
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.808 0.808
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.808 0.808
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.808 0.808
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.808 0.808
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.808 0.808
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.808 0.808
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.808 0.808
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.808 0.808
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.808 0.808
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000004161 IRF 9 113

Links

Other IRF family TFs
Other Procavia capensis TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002718 Calypte anna Aan_R002718 I 0.000
Afo_R000376 Aptenodytes forsteri Afo_R000376 I 0.000
Alligator_sinensis_CCG007030.1 Alligator sinensis Alligator_sinensis_CCG007030.1 I 0.000
Alligator_sinensis_CCG016908.1 Alligator sinensis Alligator_sinensis_CCG016908.1 I 0.000
ATF6 Anolis carolinensis ENSACAG00000001336 I 0.000
ATF6 Bos taurus ENSBTAG00000005227 I 0.000
ATF6 Canis familiaris ENSCAFG00000013068 I 0.000
ATF6 Choloepus hoffmanni ENSCHOG00000009031 I 0.000
ATF6 Callithrix jacchus ENSCJAG00000004572 I 0.000
ATF6 Cavia porcellus ENSCPOG00000010325 I 0.000
atf6 Danio rerio ENSDARG00000012656 I 0.000
ATF6 Equus caballus ENSECAG00000022307 I 0.000
ATF6 Erinaceus europaeus ENSEEUG00000000007 I 0.000
ATF6 Echinops telfairi ENSETEG00000004183 I 0.000
ATF6 Felis catus ENSFCAG00000023651 I 0.000
ATF6 Homo sapiens ENSG00000118217 D 0.000
atf6 Gasterosteus aculeatus ENSGACG00000011702 I 0.000
ATF6 Gorilla gorilla ENSGGOG00000013807 I 0.000
ATF6 Loxodonta africana ENSLAFG00000003622 I 0.000
ATF6 Meleagris gallopavo ENSMGAG00000005185 I 0.000
ATF6 Microcebus murinus ENSMICG00000000038 I 0.000
ATF6 Macaca mulatta ENSMMUG00000004049 I 0.000
ATF6 Monodelphis domestica ENSMODG00000000980 I 0.000
Atf6 Mus musculus ENSMUSG00000026663 I 0.000
ATF6 Ornithorhynchus anatinus ENSOANG00000009735 I 0.000
ATF6 Oryctolagus cuniculus ENSOCUG00000007930 I 0.000
ATF6 Otolemur garnettii ENSOGAG00000001917 I 0.000
atf6 Oryzias latipes ENSORLG00000016676 I 0.000
ATF6 Pan troglodytes ENSPTRG00000001596 I 0.000
Atf6 Rattus norvegicus ENSRNOG00000024632 I 0.000
ATF6 Sus scrofa ENSSSCG00000006346 I 0.000
ATF6 Tupaia belangeri ENSTBEG00000015845 I 0.000
ATF6 Taeniopygia guttata ENSTGUG00000017057 I 0.000
atf6 Takifugu rubripes ENSTRUG00000006660 I 0.000
ATF6 Tursiops truncatus ENSTTRG00000008508 I 0.000
ATF6 Vicugna pacos ENSVPAG00000004732 I 0.000
atf6 Xenopus tropicalis XB-GENE-983814 I 0.000
atf6.S Xenopus laevis XB-GENE-983817 I 0.000
ATF6B Anolis carolinensis ENSACAG00000010535 I 0.000
ATF6B Bos taurus ENSBTAG00000008794 I 0.000
ATF6B Canis familiaris ENSCAFG00000000761 I 0.000
ATF6B Callithrix jacchus ENSCJAG00000036009 I 0.000
ATF6B Cavia porcellus ENSCPOG00000023551 I 0.000
ATF6B Dasypus novemcinctus ENSDNOG00000042135 I 0.000
Atf6b Dipodomys ordii ENSDORG00000004227 I 0.000
ATF6B Equus caballus ENSECAG00000021507 I 0.000
ATF6B Felis catus ENSFCAG00000018408 I 0.000
ATF6B Homo sapiens ENSG00000213676 D 0.000
ATF6B Gorilla gorilla ENSGGOG00000004870 I 0.000
ATF6B Loxodonta africana ENSLAFG00000020739 I 0.000
ATF6B Myotis lucifugus ENSMLUG00000026641 I 0.000
ATF6B Macaca mulatta ENSMMUG00000015229 I 0.000
ATF6B Monodelphis domestica ENSMODG00000014920 I 0.000
Atf6b Mus musculus ENSMUSG00000015461 I 0.000
ATF6B Oryctolagus cuniculus ENSOCUG00000023089 I 0.000
ATF6B Otolemur garnettii ENSOGAG00000032721 I 0.000
ATF6B Ochotona princeps ENSOPRG00000019053 I 0.000
ATF6B Procavia capensis ENSPCAG00000009251 I 0.000
ATF6B Pan troglodytes ENSPTRG00000034357 I 0.000
ATF6B Pteropus vampyrus ENSPVAG00000005144 I 0.000
Atf6b Rattus norvegicus ENSRNOG00000000431 I 0.000
ATF6B Sus scrofa ENSSSCG00000001430 I 0.000
ATF6B Tursiops truncatus ENSTTRG00000005958 I 0.000
Brh_R005562 Buceros rhinoceros Brh_R005562 I 0.000
CapteG216503 Capitella teleta CapteG216503 I 0.000
ENSAMEG00000001631 Ailuropoda melanoleuca ENSAMEG00000001631 I 0.000
ENSAMEG00000002381 Ailuropoda melanoleuca ENSAMEG00000002381 I 0.000
ENSAMXG00000010343 Astyanax mexicanus ENSAMXG00000010343 I 0.000
ENSAPLG00000013950 Anas platyrhynchos ENSAPLG00000013950 I 0.000
ENSBTAP00000042742-D1 Bos grunniens ENSBTAP00000042742-D1 I 0.000
ENSCSAG00000002721 Chlorocebus sabaeus ENSCSAG00000002721 I 0.000
ENSCSAG00000009237 Chlorocebus sabaeus ENSCSAG00000009237 I 0.000
ENSDNOG00000008226 Dasypus novemcinctus ENSDNOG00000008226 I 0.000
ENSFALG00000003490 Ficedula albicollis ENSFALG00000003490 I 0.000
ENSGALG00000002658 Gallus gallus ENSGALG00000002658 I 0.000
ENSGMOG00000018033 Gadus morhua ENSGMOG00000018033 I 0.000
ENSLACG00000012831 Latimeria chalumnae ENSLACG00000012831 I 0.000
ENSLOCG00000001278 Lepisosteus oculatus ENSLOCG00000001278 I 0.000
ENSMEUG00000008122 Macropus eugenii ENSMEUG00000008122 I 0.000
ENSMPUG00000003493 Mustela putorius furo ENSMPUG00000003493 I 0.000
ENSMPUG00000010305 Mustela putorius furo ENSMPUG00000010305 I 0.000
ENSNLEG00000006562 Nomascus leucogenys ENSNLEG00000006562 I 0.000
ENSNLEG00000014528 Nomascus leucogenys ENSNLEG00000014528 I 0.000
ENSOARG00000010418 Ovis aries ENSOARG00000010418 I 0.000
ENSONIG00000002137 Oreochromis niloticus ENSONIG00000002137 I 0.000
ENSP00000356919 Macaca fascicularis ENSP00000356919 I 0.000
ENSP00000356919-D1 Bos grunniens ENSP00000356919-D1 I 0.000
ENSP00000364349 Macaca fascicularis ENSP00000364349 I 0.000
ENSPANG00000006897 Papio anubis ENSPANG00000006897 I 0.000
ENSPANG00000021910 Papio anubis ENSPANG00000021910 I 0.000
ENSPFOG00000018418 Poecilia formosa ENSPFOG00000018418 I 0.000
ENSPMAG00000007037 Petromyzon marinus ENSPMAG00000007037 I 0.000
ENSPPYG00000000589 Pongo abelii ENSPPYG00000000589 I 0.000
ENSPPYG00000016479 Pongo abelii ENSPPYG00000016479 I 0.000
ENSPSIG00000016522 Pelodiscus sinensis ENSPSIG00000016522 I 0.000
ENSSHAG00000005867 Sarcophilus harrisii ENSSHAG00000005867 I 0.000
ENSSHAG00000010010 Sarcophilus harrisii ENSSHAG00000010010 I 0.000
ENSSTOG00000027684 Ictidomys tridecemlineatus ENSSTOG00000027684 I 0.000
ENSTSYG00000002035 Tarsius syrichta ENSTSYG00000002035 I 0.000
ENSTSYG00000003325 Tarsius syrichta ENSTSYG00000003325 I 0.000
ENSXMAG00000013231 Xiphophorus maculatus ENSXMAG00000013231 I 0.000
Gfo_R012350 Geospiza fortis Gfo_R012350 I 0.000
Myotis_brandtii_ATF6B_10007217 Myotis brandtii Myotis_brandtii_ATF6B_10007217 I 0.000
Myotis_brandtii_ATF6_10024274 Myotis brandtii Myotis_brandtii_ATF6_10024274 I 0.000
Ogr01669 Ophisaurus gracilis Ogr01669 I 0.000
Ogr11447 Ophisaurus gracilis Ogr11447 I 0.000
Pvit_13420 Pogona vitticeps Pvit_13420 I 0.000
Pvit_17701 Pogona vitticeps Pvit_17701 I 0.000