CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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IRF3
(
Pteropus vampyrus
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSPVAG00000010968
T244362_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irf3
M00174_2.00
Mus musculus
RDWNBGMAAS
STTKCVNWHY
PBM
Badis et al.(2009)
Irf3_3985
0.894
0.894
IRF3
M03331_2.00
Homo sapiens
NNRRAANGGAAACCGAAACYR
YRGTTTCGGTTTCCNTTYYNN
SELEX
Jolma et al.(2013)
IRF3_1
0.894
0.894
IRF3
M05531_2.00
Homo sapiens
DCVGTTTCSNSGAAACCGMAASN
NSTTKCGGTTTCSNSGAAACBGH
SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX
0.894
0.894
IRF3
M05533_2.00
Homo sapiens
HSGAAAVBGAAACYGAAACN
NGTTTCRGTTTCVBTTTCSD
SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX
0.894
0.894
IRF3
M09234_2.00
Homo sapiens
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B
0.894
0.894
Irf3
M09241_2.00
Mus musculus
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A
0.894
0.894
IRF3
M10883_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF3_Q3
0.894
0.894
IRF3
M05532_2.00
Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV
BTWTYNKTTTCCDGGAAASHGM
SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX
0.894
0.894
IRF3
M05534_2.00
Homo sapiens
HGGAAABBGAAASBGAAASN
NSTTTCVSTTTCVVTTTCCD
SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX
0.894
0.894
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000010338
IRF
7
110
RILPWLVSQLDSGQLEGVAWLDESHTRFRIPWKHGLRQDAQQEDFGIFQAWAQASGAYTPGKDKPDLPTWKRNFRSALNRKEVLRLAEDRSKDPRDPHKIYEFV
Links
Other
IRF
family TFs
Other
Pteropus vampyrus
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000013892
Ailuropoda melanoleuca
ENSAMEG00000013892
I
0.942
ENSBTAP00000031815-D1
Bos grunniens
ENSBTAP00000031815-D1
I
0.913
ENSCSAG00000002477
Chlorocebus sabaeus
ENSCSAG00000002477
I
0.865
ENSMEUG00000004666
Macropus eugenii
ENSMEUG00000004666
I
0.750
ENSMMUP00000031524
Macaca fascicularis
ENSMMUP00000031524
I
0.865
ENSMPUG00000002477
Mustela putorius furo
ENSMPUG00000002477
I
0.942
ENSNLEG00000005277
Nomascus leucogenys
ENSNLEG00000005277
I
0.891
ENSOARG00000013335
Ovis aries
ENSOARG00000013335
I
0.913
ENSPANG00000014697
Papio anubis
ENSPANG00000014697
I
0.865
ENSPPYG00000010260
Pongo abelii
ENSPPYG00000010260
I
0.894
ENSPTRG00000011309
Pan troglodytes
ENSPTRG00000011309
I
0.894
ENSSTOG00000022900
Ictidomys tridecemlineatus
ENSSTOG00000022900
I
0.952
ENSTBEG00000003466
Tupaia belangeri
ENSTBEG00000003466
I
0.891
IRF3
Otolemur garnettii
ENSOGAG00000011935
I
0.790
IRF3
Bos taurus
ENSBTAG00000006633
I
0.913
IRF3
Ochotona princeps
ENSOPRG00000001971
I
0.798
IRF3
Procavia capensis
ENSPCAG00000008633
I
0.817
Irf3
Rattus norvegicus
ENSRNOG00000043388
I
0.894
IRF3
Sorex araneus
ENSSARG00000006248
I
0.779
IRF3
Sus scrofa
ENSSSCG00000003178
I
0.923
IRF3
Tursiops truncatus
ENSTTRG00000005531
I
0.923
IRF3
Oryctolagus cuniculus
ENSOCUG00000027558
I
0.854
Irf3
Mus musculus
ENSMUSG00000003184
D
0.894
IRF3
Macaca mulatta
ENSMMUG00000022735
I
0.865
IRF3
Myotis lucifugus
ENSMLUG00000023427
I
0.923
IRF3
Microcebus murinus
ENSMICG00000001752
I
0.945
IRF3
Loxodonta africana
ENSLAFG00000028074
I
0.719
IRF3
Gorilla gorilla
ENSGGOG00000000499
I
0.894
IRF3
Homo sapiens
ENSG00000126456
D
0.902
IRF3
Felis catus
ENSFCAG00000006074
I
0.913
IRF3
Equus caballus
ENSECAG00000018265
I
0.865
IRF3
Dasypus novemcinctus
ENSDNOG00000040858
I
0.837
IRF3
Cavia porcellus
ENSCPOG00000026146
I
0.856
IRF3
Callithrix jacchus
ENSCJAG00000003637
I
0.843
IRF3
Canis familiaris
ENSCAFG00000003594
I
0.893
Myotis_brandtii_IRF3_10017659
Myotis brandtii
Myotis_brandtii_IRF3_10017659
I
0.923