txndc15 (Tetraodon nigroviridis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTNIG00000019636 T244427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.702 0.702
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.702 0.702
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.702 0.702
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.702 0.702
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.702 0.702
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.702 0.702
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.702 0.702
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.702 0.702
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000003863 IRF 7 111
ENSTNIP00000022879 IRF 7 111

Links

Other IRF family TFs
Other Tetraodon nigroviridis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA006779 Anopheles arabiensis AARA006779 N
ACEP24929 Atta cephalotes ACEP24929 N
ACOM042123 Anopheles coluzzii ACOM042123 N
ADAC009993 Anopheles darlingi ADAC009993 N
ADIR009008 Anopheles dirus ADIR009008 N
AEPI002763 Anopheles epiroticus AEPI002763 N
AFAF016384 Anopheles farauti AFAF016384 N
AFUN005064 Anopheles funestus AFUN005064 N
AGAP002163 Anopheles gambiae AGAP002163 N
AMAM014509 Anopheles maculatus AMAM014509 N
AMEC016444 Anopheles melas AMEC016444 N
AMEM001056 Anopheles merus AMEM001056 N
AMIN003105 Anopheles minimus AMIN003105 N
AQUA008618 Anopheles quadriannulatus AQUA008618 N
BGIBMGA009909 Bombyx mori BGIBMGA009909 N
br Drosophila melanogaster FBgn0000210 D
Cflo_02156--NP_001035356.1_APIME Camponotus floridanus Cflo_02156--NP_001035356.1_APIME N
CPIJ003271 Culex quinquefasciatus CPIJ003271 N
CpipJ_CPIJ003271 Culex pipiens CpipJ_CPIJ003271 N
GB48273 Apis mellifera GB48273 N
GE16700 Drosophila yakuba FBgn0234197 N
HMEL012334 Heliconius melpomene HMEL012334 N
Hsal_01159--NP_001035356.1_APIME Harpegnathos saltator Hsal_01159--NP_001035356.1_APIME N
KGM_00053 Danaus plexippus KGM_00053 N
LCUP011136 Lucilia cuprina LCUP011136 N
LDEC009788 Leptinotarsa decemlineata LDEC009788 N
LLOJ000809 Lutzomyia longipalpis LLOJ000809 N
MDOA002234 Musca domestica MDOA002234 N
NV15003 Nasonia vitripennis NV15003 N
PPAI010690 Phlebotomus papatasi PPAI010690 N
SINV21863 Solenopsis invicta SINV21863 N
TC005476 Tribolium castaneum TC005476 N