Alligator_sinensis_CCG003072.1 (Alligator sinensis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Alligator_sinensis_CCG003072.1 T244507_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF9
M02258_2.00 		Sus scrofa
WNYGAAASY
RSTTTCRNW		 PBM
Weirauch et al.(2014)
pTH9287 		0.750 0.750
IRF9
M02257_2.00 		Ochotona princeps
DNYRAAAVND
HNBTTTYRNH		 PBM
Weirauch et al.(2014)
pTH9337 		0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003072.1 IRF 11 99

Links

Other IRF family TFs
Other Alligator sinensis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSACAG00000003946 Anolis carolinensis ENSACAG00000003946 I 0.712
ENSAMEG00000016347 Ailuropoda melanoleuca ENSAMEG00000016347 I 0.750
ENSCSAG00000016071 Chlorocebus sabaeus ENSCSAG00000016071 I 0.750
ENSDORG00000009268 Dipodomys ordii ENSDORG00000009268 I 0.731
ENSMMUG00000012474 Macaca mulatta ENSMMUG00000012474 I 0.750
ENSMPUG00000005961 Mustela putorius furo ENSMPUG00000005961 I 0.731
ENSOARG00000019201 Ovis aries ENSOARG00000019201 I 0.731
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I 0.712
ENSPPYG00000005686 Pongo abelii ENSPPYG00000005686 I 0.750
ENSSTOG00000023450 Ictidomys tridecemlineatus ENSSTOG00000023450 I 0.731
ENSTSYG00000007445 Tarsius syrichta ENSTSYG00000007445 I 0.750
IRF9 Felis catus ENSFCAG00000018849 I 0.750
IRF9 Sus scrofa ENSSSCG00000002002 D 0.750
Irf9 Rattus norvegicus ENSRNOG00000019478 I 0.712
IRF9 Pteropus vampyrus ENSPVAG00000007716 I 0.731
IRF9 Otolemur garnettii ENSOGAG00000026670 I 0.750
IRF9 Oryctolagus cuniculus ENSOCUG00000028186 I 0.731
IRF9 Canis familiaris ENSCAFG00000012007 I 0.750
IRF9 Monodelphis domestica ENSMODG00000003368 I 0.769
IRF9 Callithrix jacchus ENSCJAG00000007065 I 0.750
IRF9 Myotis lucifugus ENSMLUG00000025255 I 0.750
IRF9 Loxodonta africana ENSLAFG00000026182 I 0.731
IRF9 Cavia porcellus ENSCPOG00000026474 I 0.750
Pvit_14926 Pogona vitticeps Pvit_14926 I 0.712