ENSP00000370343-D1 (Bos grunniens)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 ENSP00000370343-D1 T244542_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		1.000 1.000
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		1.000 1.000
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		1.000 1.000
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		1.000 1.000
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		1.000 1.000
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		1.000 1.000
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		1.000 1.000
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		1.000 1.000
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		1.000 1.000
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		1.000 1.000
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		1.000 1.000
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.990 0.990
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.990 0.990
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.810 0.810
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.810 0.810
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.810 0.810
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.810 0.810
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.810 0.810
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.810 0.810
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.810 0.810
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.810 0.810
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.810 0.810
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000370343-D1 IRF 23 128

Links

Other IRF family TFs
Other Bos grunniens TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006196 Calypte anna Aan_R006196 I 0.000
Afo_R011287 Aptenodytes forsteri Afo_R011287 I 0.000
Alligator_sinensis_CCG021133.1 Alligator sinensis Alligator_sinensis_CCG021133.1 I 0.000
Brh_R003680 Buceros rhinoceros Brh_R003680 I 0.000
Cmyd_10007079 Chelonia mydas Cmyd_10007079 I 0.000
ENSAMEG00000006266 Ailuropoda melanoleuca ENSAMEG00000006266 I 0.000
ENSAMXG00000000502 Astyanax mexicanus ENSAMXG00000000502 I 0.000
ENSAPLG00000007739 Anas platyrhynchos ENSAPLG00000007739 I 0.000
ENSBTAP00000028687-D1 Bos grunniens ENSBTAP00000028687-D1 I 0.000
ENSCSAG00000003215 Chlorocebus sabaeus ENSCSAG00000003215 I 0.000
ENSFALG00000000674 Ficedula albicollis ENSFALG00000000674 I 0.000
ENSGMOG00000014955 Gadus morhua ENSGMOG00000014955 I 0.000
ENSLACG00000012019 Latimeria chalumnae ENSLACG00000012019 I 0.000
ENSLOCG00000012514 Lepisosteus oculatus ENSLOCG00000012514 I 0.000
ENSMEUG00000006663 Macropus eugenii ENSMEUG00000006663 I 0.000
ENSMMUP00000014032 Macaca fascicularis ENSMMUP00000014032 I 0.000
ENSMPUG00000010509 Mustela putorius furo ENSMPUG00000010509 I 0.000
ENSNLEG00000011454 Nomascus leucogenys ENSNLEG00000011454 I 0.000
ENSOARG00000001511 Ovis aries ENSOARG00000001511 I 0.000
ENSONIG00000001148 Oreochromis niloticus ENSONIG00000001148 I 0.000
ENSPANG00000021451 Papio anubis ENSPANG00000021451 I 0.000
ENSPFOG00000012687 Poecilia formosa ENSPFOG00000012687 I 0.000
ENSPFOG00000012990 Poecilia formosa ENSPFOG00000012990 I 0.000
ENSPMAG00000002770 Petromyzon marinus ENSPMAG00000002770 I 0.000
ENSPPYG00000008392 Pongo abelii ENSPPYG00000008392 I 0.000
ENSSHAG00000014833 Sarcophilus harrisii ENSSHAG00000014833 I 0.000
ENSSTOG00000006741 Ictidomys tridecemlineatus ENSSTOG00000006741 I 0.000
ENSXMAG00000008972 Xiphophorus maculatus ENSXMAG00000008972 I 0.000
Gfo_R009044 Geospiza fortis Gfo_R009044 I 0.000
Myotis_brandtii_STAT3_10015327 Myotis brandtii Myotis_brandtii_STAT3_10015327 I 0.000
Ogr09154 Ophisaurus gracilis Ogr09154 I 0.000
Pvit_13933 Pogona vitticeps Pvit_13933 I 0.000
STAT3 Sus scrofa ENSSSCG00000017403 I 0.000
STAT3 Taeniopygia guttata ENSTGUG00000002600 I 0.000
stat3 Takifugu rubripes ENSTRUG00000015348 I 0.000
STAT3 Tursiops truncatus ENSTTRG00000007163 I 0.000
STAT3 Sorex araneus ENSSARG00000014231 I 0.000
Stat3 Rattus norvegicus ENSRNOG00000019742 I 0.000
STAT3 Otolemur garnettii ENSOGAG00000001517 I 0.000
STAT3 Pan troglodytes ENSPTRG00000009200 I 0.000
STAT3 Anolis carolinensis ENSACAG00000017940 I 0.000
STAT3 Bos taurus ENSBTAG00000021523 I 0.000
STAT3 Callithrix jacchus ENSCJAG00000000409 I 0.000
STAT3 Cavia porcellus ENSCPOG00000007939 I 0.000
stat3 Danio rerio ENSDARG00000022712 I 0.000
STAT3 Dasypus novemcinctus ENSDNOG00000001471 I 0.000
STAT3 Equus caballus ENSECAG00000016439 I 0.000
STAT3 Felis catus ENSFCAG00000002154 I 0.000
STAT3 Homo sapiens ENSG00000168610 D 0.000
stat3 Gasterosteus aculeatus ENSGACG00000008607 I 0.000
STAT3 Gallus gallus ENSGALG00000003267 I 0.000
STAT3 Gorilla gorilla ENSGGOG00000017110 I 0.000
STAT3 Loxodonta africana ENSLAFG00000014062 I 0.000
STAT3 Meleagris gallopavo ENSMGAG00000003545 I 0.000
STAT3 Microcebus murinus ENSMICG00000012015 I 0.000
STAT3 Myotis lucifugus ENSMLUG00000017449 I 0.000
STAT3 Macaca mulatta ENSMMUG00000010707 I 0.000
STAT3 Monodelphis domestica ENSMODG00000028212 I 0.000
Stat3 Mus musculus ENSMUSG00000004040 D 0.000
STAT3 Oryctolagus cuniculus ENSOCUG00000011034 I 0.000
stat3 Oryzias latipes ENSORLG00000004061 I 0.000
stat3.1 Xenopus tropicalis XB-GENE-481047 I 0.000
stat3.1.L Xenopus laevis XB-GENE-865436 I 0.000
stat3.2 Xenopus tropicalis XB-GENE-1020976 I 0.000
stat3.2.L Xenopus laevis XB-GENE-1020979 I 0.000