CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30035397m.g
(
Saccoglossus kowalevskii
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00605 (IRF)
IPR001346
Sakowv30035397m.g
T244612_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23935301_peptide
IRF
17
122
RMRPWLIDQISSGNYRGLAWLNEEKTMFKIPWKHAGKQDYDKEEDPKIFKAWSLHTGKYREGVDDPDPAMWKTRLRTALNKLPDIQEVQEKTQLDIPEPYRVYRLL
Links
Other
IRF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_064710
Albugo laibachii
ALNC14_064710
N
estExt_fgenesh1_kg.C_21004
Phytophthora capsici
estExt_fgenesh1_kg.C_21004
N
F443_16546
Phytophthora parasitica
F443_16546
N
fgenesh-par_contig_1011-abinit-gene-0.29
Pythium arrhenomanes
fgenesh-par_contig_1011-abinit-gene-0.29
N
fgenesh_scip_prom.28083.5755
Phytophthora lateralis
fgenesh_scip_prom.28083.5755
N
fgenesh_scip_prom.46568.6963
Phytophthora kernoviae
fgenesh_scip_prom.46568.6963
N
HpaG800006
Hyaloperonospora arabidopsidis
HpaG800006
N
maker-pag1_scaffold_501-fgenesh-gene-0.1
Pythium aphanidermatum
maker-pag1_scaffold_501-fgenesh-gene-0.1
N
maker-pve_contig_582-fgenesh-gene-0.2
Pythium vexans
maker-pve_contig_582-fgenesh-gene-0.2
N
Phyra78306
Phytophthora ramorum
Phyra78306
N
Physo133633
Phytophthora sojae
Physo133633
N
PITG_03223
Phytophthora infestans
PITG_03223
N
PYU1_G000626
Pythium ultimum
PYU1_G000626
N
SPRG_08492
Saprolegnia parasitica
SPRG_08492
N