Bo00285s360 (Brassica oleracea)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Bo00285s360 T244951_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD23
M06964_2.00 		Arabidopsis thaliana
NGCGNDRAWNNCGCN
NGCGNNWTYHNCGCN		 Dap-seq
OMalley et al.(2016)
LBD23_col_a 		0.859 0.859
LBD23
M06965_2.00 		Arabidopsis thaliana
DGCGDDRRWNNCGCN
NGCGNNWYYHHCGCH		 Dap-seq
OMalley et al.(2016)
LBD23_colamp_a 		0.859 0.859
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo00285s360.1 LOB 5 103

Links

Other LOB family TFs
Other Brassica oleracea TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_08818 Capronia epimyces A1O3_08818 N
ACLA_074230 Aspergillus clavatus CADACLAG00006381 N
AFUA_2G15260 Aspergillus fumigatus CADAFUAG00004604 N
AUEXF2481DRAFT_234640 Aureobasidium subglaciale AUEXF2481DRAFT_234640 N
AUEXF2481DRAFT_701448 Aureobasidium subglaciale AUEXF2481DRAFT_701448 N
CADANGAG00007889 Aspergillus niger CADANGAG00007889 N
EURHEDRAFT_417585 Aspergillus ruber EURHEDRAFT_417585 N
fgenesh1_pg.C_scaffold_6000355 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_6000355 N
G647_01486 Cladophialophora carrionii G647_01486 N
H072_136 Dactylellina haptotyla H072_136 N
JL09_g1719 Pichia kudriavzevii JL09_g1719 N
M437DRAFT_60050 Aureobasidium melanogenum M437DRAFT_60050 N
M438DRAFT_363806 Aureobasidium pullulans M438DRAFT_363806 N
MYCFIDRAFT_79333 Pseudocercospora fijiensis MYCFIDRAFT_79333 N
Pc12g00620 Penicillium chrysogenum Pc12g00620 N
PCH_Pc12g00620 Penicillium rubens PCH_Pc12g00620 N
PEX1_066500 Penicillium expansum PEX1_066500 N
PITC_011730 Penicillium italicum PITC_011730 N
PMAA_001790 Talaromyces marneffei PMAA_001790 N
PV04_00541 Capronia semiimmersa PV04_00541 N
PV04_04366 Capronia semiimmersa PV04_04366 N
PV04_08619 Capronia semiimmersa PV04_08619 N
PV05_06583 Exophiala xenobiotica PV05_06583 N
PV05_09876 Exophiala xenobiotica PV05_09876 N
PV06_00861 Exophiala oligosperma PV06_00861 N
PV06_05578 Exophiala oligosperma PV06_05578 N
PV07_06253 Cladophialophora immunda PV07_06253 N
PV08_00876 Exophiala spinifera PV08_00876 N
PV09_07973 Verruconis gallopava PV09_07973 N
PV10_01954 Exophiala mesophila PV10_01954 N
PV11_00794 Exophiala sideris PV11_00794 N
TSTA_099190 Talaromyces stipitatus TSTA_099190 N
U727_00429850571 Penicillium solitum U727_00429850571 N
Z518_02267 Rhinocladiella mackenziei Z518_02267 N
Z518_04980 Rhinocladiella mackenziei Z518_04980 N
Z519_02061 Cladophialophora bantiana Z519_02061 N