CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LBD11
(
Arabidopsis lyrata
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
fgenesh2_kg.4__820__AT2G28500.1
T245164_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4__820__AT2G28500.1
LOB
54
152
PCAACKILRRRCAEKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQV
Links
Other
LOB
family TFs
Other
Arabidopsis lyrata
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI005198
Acyrthosiphon pisum
ACYPI005198
I
0.000
CGI_10014093
Crassostrea gigas
CGI_10014093
N
0.000
ENSPMAG00000001074
Petromyzon marinus
ENSPMAG00000001074
I
0.000
fgenesh2_pg.scaffold_205000025
Branchiostoma floridae
fgenesh2_pg.scaffold_205000025
I
0.000
mxi1
Danio rerio
ENSDARG00000040884
I
0.000
NV10716
Nasonia vitripennis
NV10716
I
0.000
Sakowv30007563m.g
Saccoglossus kowalevskii
Sakowv30007563m.g
I
0.000
tetur09g05570
Tetranychus urticae
tetur09g05570
I
0.000