CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000131978
(
Malus domestica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
MDP0000131978
T247072_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000131978
LOB
28
81
VRPSRARACHVPAIFKSVLYEACGRIVNPTYGSVGMMWSGSWDQCQAAVDAVLE
Links
Other
LOB
family TFs
Other
Malus domestica
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000447
Ailuropoda melanoleuca
ENSAMEG00000000447
N
0.000
ENSBTAG00000010252
Bos taurus
ENSBTAG00000010252
N
0.000
ENSCSAG00000017904
Chlorocebus sabaeus
ENSCSAG00000017904
N
0.000
ENSLAFG00000018574
Loxodonta africana
ENSLAFG00000018574
N
0.000
ENSMLUG00000016482
Myotis lucifugus
ENSMLUG00000016482
N
0.000
ENSMPUG00000001181
Mustela putorius furo
ENSMPUG00000001181
N
0.000
ENSNLEG00000006278
Nomascus leucogenys
ENSNLEG00000006278
N
0.000
ENSP00000331577
Macaca fascicularis
ENSP00000331577
N
0.000
ENSPANG00000006799
Papio anubis
ENSPANG00000006799
N
0.000
ENSSARG00000012675
Sorex araneus
ENSSARG00000012675
N
0.000
ENSSSCG00000003739
Sus scrofa
ENSSSCG00000003739
N
0.000
ENSSTOG00000023511
Ictidomys tridecemlineatus
ENSSTOG00000023511
N
0.000
Myotis_brandtii_ZNF397_10017291
Myotis brandtii
Myotis_brandtii_ZNF397_10017291
N
0.000
Zfp397
Mus musculus
ENSMUSG00000024276
N
0.000
Zfp397
Rattus norvegicus
ENSRNOG00000048101
N
0.000
Zfp397
Dipodomys ordii
ENSDORG00000009608
N
0.000
ZNF397
Macaca mulatta
ENSMMUG00000020530
N
0.000
ZNF397
Otolemur garnettii
ENSOGAG00000029778
N
0.000
ZNF397
Homo sapiens
ENSG00000186812
N
0.000
ZNF397
Pteropus vampyrus
ENSPVAG00000017450
N
0.000
ZNF397
Felis catus
ENSFCAG00000023533
N
0.000
ZNF397
Equus caballus
ENSECAG00000015789
N
0.000
ZNF397
Tupaia belangeri
ENSTBEG00000014907
N
0.000
ZNF397
Tursiops truncatus
ENSTTRG00000013486
N
0.000
ZNF397
Callithrix jacchus
ENSCJAG00000021000
N
0.000
ZNF397
Canis familiaris
ENSCAFG00000017918
N
0.000