MDP0000446238 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000446238 T247126_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000446238 LOB 6 51

Links

Other LOB family TFs
Other Malus domestica TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.717
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.717
Bo6g106960 Brassica oleracea Bo6g106960 N 0.717
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.739
Bra004315 Brassica rapa Bra004315 N 0.717
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N 0.717
Carubv10022391m.g Capsella rubella Carubv10022391m.g N 0.717
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.717
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N 0.717
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N 0.717
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.717
Cla007208 Citrullus lanatus Cla007208 N 0.717
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.717
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.717
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.717
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.783
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.717
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.739
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.717
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N 0.717
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.717
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.717
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.717
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.717
LBD42 Arabidopsis thaliana AT1G68510 N 0.739
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.739
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.717
MDP0000131978 Malus domestica MDP0000131978 N 0.870
MDP0000136037 Malus domestica MDP0000136037 N 0.717
MDP0000233303 Malus domestica MDP0000233303 N 0.826
MDP0000881409 Malus domestica MDP0000881409 N 0.717
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.717
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.717
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.717
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.717
PK03169.1 Cannabis sativa PK03169.1 N 0.717
Pm029059 Prunus mume Pm029059 N 0.783
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.739
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.739
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.717
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.717
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N 0.717
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.783
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.717
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.739
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.739
TCM_012338 Theobroma cacao TCM_012338 N 0.739
TCM_019459 Theobroma cacao TCM_019459 N 0.717
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.717