Pavir.Ba01055 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.Ba01055 T247182_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba01055.1.p LOB 9 111

Links

Other LOB family TFs
Other Panicum virgatum TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1703276C Xenopus laevis 1703276C N
1703276D Xenopus laevis 1703276D I
AAA49750 Xenopus laevis AAA49750 N
Aan_R001812 Calypte anna Aan_R001812 N
Aan_R007134 Calypte anna Aan_R007134 I
AARA003138 Anopheles arabiensis AARA003138 N
AARA011782 Anopheles arabiensis AARA011782 I
AATE009299 Anopheles atroparvus AATE009299 I
ACAC_0000093601 Angiostrongylus cantonensis ACAC_0000093601 N
ACAC_0000671101 Angiostrongylus cantonensis ACAC_0000671101 N
ACEP22770 Atta cephalotes ACEP22770 N
ACHR008505 Anopheles christyi ACHR008505 N
ACOC_0000215101 Angiostrongylus costaricensis ACOC_0000215101 N
ACOC_0000334101 Angiostrongylus costaricensis ACOC_0000334101 N
ACOC_0000865601 Angiostrongylus costaricensis ACOC_0000865601 N
ACOM035026 Anopheles coluzzii ACOM035026 N
ACOM036085 Anopheles coluzzii ACOM036085 N
ACUA011088 Anopheles culicifacies ACUA011088 N
ACUA020431 Anopheles culicifacies ACUA020431 N
ACYPI086517 Acyrthosiphon pisum ACYPI086517 N
AEPI002733 Anopheles epiroticus AEPI002733 N
AEPI010384 Anopheles epiroticus AEPI010384 N
AEPI010666 Anopheles epiroticus AEPI010666 N
AFAF004701 Anopheles farauti AFAF004701 N
AFAF006159 Anopheles farauti AFAF006159 I
Afo_R002867 Aptenodytes forsteri Afo_R002867 I
Afo_R002868 Aptenodytes forsteri Afo_R002868 I
AFUN002980 Anopheles funestus AFUN002980 N
Alligator_sinensis_CCG001661.1 Alligator sinensis Alligator_sinensis_CCG001661.1 I
Alligator_sinensis_CCG004967.1 Alligator sinensis Alligator_sinensis_CCG004967.1 N
Alligator_sinensis_CCG010660.1 Alligator sinensis Alligator_sinensis_CCG010660.1 N
AMAM004568 Anopheles maculatus AMAM004568 N
AMAM008009 Anopheles maculatus AMAM008009 N
AMAM018190 Anopheles maculatus AMAM018190 I
AMEM007254 Anopheles merus AMEM007254 N
ANCCAN_11756 Ancylostoma caninum ANCCAN_11756 N
ANCCAN_12383 Ancylostoma caninum ANCCAN_12383 N
ANCCAN_18983 Ancylostoma caninum ANCCAN_18983 N
ANCCAN_23849 Ancylostoma caninum ANCCAN_23849 N
ANCCAN_25804 Ancylostoma caninum ANCCAN_25804 N
ANCCAN_27026 Ancylostoma caninum ANCCAN_27026 N
ANCCEY_10591 Ancylostoma ceylanicum ANCCEY_10591 N
ANCCEY_10891 Ancylostoma ceylanicum ANCCEY_10891 N
ANCDUO_04800 Ancylostoma duodenale ANCDUO_04800 N
AQUA010391 Anopheles quadriannulatus AQUA010391 I
AQUA015309 Anopheles quadriannulatus AQUA015309 N
ARX Callithrix jacchus ENSCJAG00000004737 N
ASIM_0000060401 Anisakis simplex ASIM_0000060401 N
ASIM_0001450801 Anisakis simplex ASIM_0001450801 N
ASIS018446 Anopheles sinensis ASIS018446 N
ASIS021849 Anopheles sinensis ASIS021849 N
ASTEI00742 Anopheles stephensi ASTEI00742 N
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 N
BARX1 Homo sapiens ENSG00000131668 D
BARX2 Ornithorhynchus anatinus ENSOANG00000000573 N
BGIBMGA003265 Bombyx mori BGIBMGA003265 N
BGIBMGA008456 Bombyx mori BGIBMGA008456 I
BGIBMGA010052 Bombyx mori BGIBMGA010052 N
BGLB006778 Biomphalaria glabrata BGLB006778 N
BGLB007714 Biomphalaria glabrata BGLB007714 N
BGLB012524 Biomphalaria glabrata BGLB012524 N
BRADI2G50510 Brachypodium distachyon BRADI2G50510 N
Brh_R008378 Buceros rhinoceros Brh_R008378 I
BTMF_0000546301 Brugia timori BTMF_0000546301 N
BTMF_0001416601 Brugia timori BTMF_0001416601 N
CAA41845 Xenopus laevis CAA41845 N
CAA41846 Xenopus laevis CAA41846 I
CapteG142082 Capitella teleta CapteG142082 N
CBG05223 Caenorhabditis briggsae CBG05223 N
Cflo_00859--XP_394119.2_APIME Camponotus floridanus Cflo_00859--XP_394119.2_APIME N
Cflo_12078--XP_001122113.1_APIME Camponotus floridanus Cflo_12078--XP_001122113.1_APIME I
CGI_10026625 Crassostrea gigas CGI_10026625 N
CGOC_0001035201 Cylicostephanus goldi CGOC_0001035201 N
Cmyd_10005403 Chelonia mydas Cmyd_10005403 I
Cmyd_10007343 Chelonia mydas Cmyd_10007343 N
Cmyd_10007464 Chelonia mydas Cmyd_10007464 I
Cmyd_10012338 Chelonia mydas Cmyd_10012338 N
csin109617 Clonorchis sinensis csin109617 N
DAPPUDRAFT_50954 Daphnia pulex DAPPUDRAFT_50954 N
DICVIV_02944 Dictyocaulus viviparus DICVIV_02944 N
DLX1 Gallus gallus ENSGALG00000018439 I
DME_0000044501 Dracunculus medinensis DME_0000044501 N
DME_0000045101 Dracunculus medinensis DME_0000045101 N
ECPE_0000357901 Echinostoma caproni ECPE_0000357901 N
ECPE_0000850801 Echinostoma caproni ECPE_0000850801 N
EEL_0000533501 Elaeophora elaphi EEL_0000533501 N
EMX1 Oryctolagus cuniculus ENSOCUG00000008208 N
ENSAMXG00000008007 Astyanax mexicanus ENSAMXG00000008007 I
ENSBTAP00000023806-D2 Bos grunniens ENSBTAP00000023806-D2 N
ENSCING00000011826 Ciona intestinalis ENSCING00000011826 N
ENSCSAG00000006765 Chlorocebus sabaeus ENSCSAG00000006765 N
ENSECAG00000017919 Equus caballus ENSECAG00000017919 I
ENSFCAG00000025984 Felis catus ENSFCAG00000025984 N
ENSGMOG00000017864 Gadus morhua ENSGMOG00000017864 N
ENSMGAG00000009298 Meleagris gallopavo ENSMGAG00000009298 N
ENSMLUG00000022220 Myotis lucifugus ENSMLUG00000022220 N
ENSOANG00000007774 Ornithorhynchus anatinus ENSOANG00000007774 N
ENSOARG00000003161 Ovis aries ENSOARG00000003161 I
ENSOARG00000010209 Ovis aries ENSOARG00000010209 N
ENSOCUG00000013528 Oryctolagus cuniculus ENSOCUG00000013528 I
ENSPMAG00000008178 Petromyzon marinus ENSPMAG00000008178 N
ENSPMAG00000008834 Petromyzon marinus ENSPMAG00000008834 N
ENSPSIG00000017365 Pelodiscus sinensis ENSPSIG00000017365 N
ENSPTRG00000017522 Pan troglodytes ENSPTRG00000017522 N
ENSPVAG00000007998 Pteropus vampyrus ENSPVAG00000007998 N
ENSSHAG00000002450 Sarcophilus harrisii ENSSHAG00000002450 N
ENSSHAG00000009294 Sarcophilus harrisii ENSSHAG00000009294 I
ENSTGUG00000000339 Taeniopygia guttata ENSTGUG00000000339 N
ENSTGUG00000011379 Taeniopygia guttata ENSTGUG00000011379 I
ENSTNIG00000016273 Tetraodon nigroviridis ENSTNIG00000016273 I
ENSTRUG00000017602 Takifugu rubripes ENSTRUG00000017602 N
ENSTSYG00000005123 Tarsius syrichta ENSTSYG00000005123 N
ENSVPAG00000010060 Vicugna pacos ENSVPAG00000010060 I
ENSXMAG00000003902 Xiphophorus maculatus ENSXMAG00000003902 I
e_gw.239.46.1 Branchiostoma floridae e_gw.239.46.1 N
GBX2 Oryzias latipes ENSORLG00000001376 I
gene25833-v1.0-hybrid Fragaria vesca gene25833-v1.0-hybrid N
GH13586 Drosophila grimshawi FBgn0121062 N
GI23625 Drosophila mojavensis FBgn0146351 N
GLYMA08G09430 Glycine max GLYMA08G09430 N
GM17434 Drosophila sechellia FBgn0172344 I
GPLIN_000113000 Globodera pallida GPLIN_000113000 N
GPLIN_000138000 Globodera pallida GPLIN_000138000 N
GPUH_0000797801 Gongylonema pulchrum GPUH_0000797801 N
GRMZM2G004334 Zea mays GRMZM2G004334 N
GRMZM2G123140 Zea mays GRMZM2G123140 I
Hba_10731 Heterorhabditis bacteriophora Hba_10731 N
HCOI02012200 Haemonchus contortus HCOI02012200 N
HelroG147207 Helobdella robusta HelroG147207 N
HelroG148863 Helobdella robusta HelroG148863 N
HelroG192586 Helobdella robusta HelroG192586 N
hesx1 Danio rerio ENSDARG00000054509 N
HHAL004742-PA Halyomorpha halys HHAL004742-PA N
HHEX Homo sapiens ENSG00000152804 I
Hhex Mus musculus ENSMUSG00000024986 I
HMEL002756 Heliconius melpomene HMEL002756 N
HMEL003744 Heliconius melpomene HMEL003744 N
HMEL006102 Heliconius melpomene HMEL006102 N
HMEL010247 Heliconius melpomene HMEL010247 N
HMEL016138 Heliconius melpomene HMEL016138 N
HMX2 Felis catus ENSFCAG00000023440 N
HNAJ_0000607701 Hymenolepis nana HNAJ_0000607701 N
HNAJ_0000873601 Hymenolepis nana HNAJ_0000873601 N
HOXB2 Pan troglodytes ENSPTRG00000009352 I
hoxb2.S Xenopus laevis XB-GENE-478530 I
hoxc12a Gasterosteus aculeatus ENSGACG00000009391 N
hoxc6.S Xenopus laevis XB-GENE-865143 I
HPBE_0002029201 Heligmosomoides bakeri HPBE_0002029201 N
HPBE_0002330201 Heligmosomoides bakeri HPBE_0002330201 N
HPBE_0002651601 Heligmosomoides bakeri HPBE_0002651601 N
Hsal_06516--XP_001122113.1_APIME Harpegnathos saltator Hsal_06516--XP_001122113.1_APIME I
ISCW010454 Ixodes scapularis ISCW010454 N
ISCW012145 Ixodes scapularis ISCW012145 N
KGM_15359 Danaus plexippus KGM_15359 N
KGM_17085 Danaus plexippus KGM_17085 N
L798_03158 Zootermopsis nevadensis L798_03158 N
LCUP000734 Lucilia cuprina LCUP000734 N
LCUP010920 Lucilia cuprina LCUP010920 N
LDEC009173 Leptinotarsa decemlineata LDEC009173 N
LDEC017208 Leptinotarsa decemlineata LDEC017208 N
LLOJ003466 Lutzomyia longipalpis LLOJ003466 N
LOAG_18696 Loa loa LOAG_18696 N
maker-nMf.1.1.scaf05303-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05303-snap-gene-0.8 N
maker-nMf.1.1.scaf28435-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf28435-augustus-gene-0.3 N
MCINX004708 Melitaea cinxia MCINX004708 N
MDP0000690933 Malus domestica MDP0000690933 N
MESCA006388 Megaselia scalaris MESCA006388 N
MESCA011418 Megaselia scalaris MESCA011418 N
mgf006959m Mimulus guttatus mgf006959m N
Minc02159 Meloidogyne incognita Minc02159 N
Minc16530 Meloidogyne incognita Minc16530 N
Myotis_brandtii_Barx2_10007775 Myotis brandtii Myotis_brandtii_Barx2_10007775 N
NBR_0000086301 Nippostrongylus brasiliensis NBR_0000086301 N
nDi.2.2.2.g10664 Dirofilaria immitis nDi.2.2.2.g10664 I
NECAME_08983 Necator americanus NECAME_08983 N
NECAME_11765 Necator americanus NECAME_11765 N
NECAME_15451 Necator americanus NECAME_15451 N
NEMVEDRAFT_v1g101680 Nematostella vectensis NEMVEDRAFT_v1g101680 N
NEMVEDRAFT_v1g128275 Nematostella vectensis NEMVEDRAFT_v1g128275 N
NEMVEDRAFT_v1g128296 Nematostella vectensis NEMVEDRAFT_v1g128296 N
NKX6-1 Homo sapiens ENSG00000163623 D
nkx6-1 Xenopus tropicalis XB-GENE-483574 I
nOo.2.0.1.g12002 Onchocerca ochengi nOo.2.0.1.g12002 N
nRc.2.0.1.g08298 Romanomermis culicivorax nRc.2.0.1.g08298 N
nRc.2.0.1.g21365 Romanomermis culicivorax nRc.2.0.1.g21365 N
Ocbimv22010205m.g Octopus bimaculoides Ocbimv22010205m.g N
Ocbimv22024994m.g Octopus bimaculoides Ocbimv22024994m.g N
OFLC_0000421701 Onchocerca flexuosa OFLC_0000421701 N
Ogr05500 Ophisaurus gracilis Ogr05500 N
Ogr09559 Ophisaurus gracilis Ogr09559 N
OLONG_008306 Oryza longistaminata OLONG_008306 N
OLONG_012459 Oryza longistaminata OLONG_012459 N
PEQ_0000993201 Parascaris equorum PEQ_0000993201 N
PHUM118950 Pediculus humanus PHUM118950 N
PHUM359880 Pediculus humanus PHUM359880 N
PHUM359910 Pediculus humanus PHUM359910 N
POPTR_0012s03550 Populus trichocarpa POPTR_0012s03550 N
PPA08598 Pristionchus pacificus PPA08598 N
PPA28666 Pristionchus pacificus PPA28666 N
PPAI004705 Phlebotomus papatasi PPAI004705 N
PPAI006607 Phlebotomus papatasi PPAI006607 I
PXEA_0003635301 Protopolystoma xenopodis PXEA_0003635301 N
RAX2 Microcebus murinus ENSMICG00000014768 I
RPRC003713 Rhodnius prolixus RPRC003713 N
RPRC010976 Rhodnius prolixus RPRC010976 I
SBAD_0000185501 Soboliphyme baturini SBAD_0000185501 N
SBAD_0000495201 Soboliphyme baturini SBAD_0000495201 N
scaffold61-EXSNAP2012.75 Pristionchus exspectatus scaffold61-EXSNAP2012.75 N
SINV22981 Solenopsis invicta SINV22981 N
Sjc_0085440 Schistosoma japonicum Sjc_0085440 N
SMTD_0001030501 Schistosoma mattheei SMTD_0001030501 N
SMU15011671 Schmidtea mediterranea SMU15011671 I
SNAPOd2T00002147001 Oikopleura dioica SNAPOd2T00002147001 N
SNAPOd2T00005019001 Oikopleura dioica SNAPOd2T00005019001 N
SNAPOd2T00015975001 Oikopleura dioica SNAPOd2T00015975001 N
SPAL_0000530600 Strongyloides papillosus SPAL_0000530600 N
SPER_0001142801 Spirometra erinaceieuropaei SPER_0001142801 I
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N
SPER_0002183801 Spirometra erinaceieuropaei SPER_0002183801 N
SPER_0003632001 Spirometra erinaceieuropaei SPER_0003632001 N
SPER_0003833401 Spirometra erinaceieuropaei SPER_0003833401 N
SPU_022574 Strongylocentrotus purpuratus SPU_022574 N
SSLN_0000633001 Schistocephalus solidus SSLN_0000633001 N
SVUK_0001081801 Strongylus vulgaris SVUK_0001081801 N
T265_10172 Opisthorchis viverrini T265_10172 N
T265_14387 Opisthorchis viverrini T265_14387 N
Tal_R004953 Tyto alba Tal_R004953 N
Tal_R008067 Tyto alba Tal_R008067 I
TCLT_0000655201 Thelazia callipaeda TCLT_0000655201 I
TCNE_0000266601 Toxocara canis TCNE_0000266601 N
TCNE_0000505101 Toxocara canis TCNE_0000505101 N
TCNE_0000939301 Toxocara canis TCNE_0000939301 N
Tlx1 Mus musculus ENSMUSG00000025215 I
tlx2 Danio rerio ENSDARG00000011273 I
TLX2 Ochotona princeps ENSOPRG00000014031 N
TLX3 Taeniopygia guttata ENSTGUG00000014966 N
Traes_1DL_9FB53E48A Triticum aestivum Traes_1DL_9FB53E48A N
Traes_6BL_4301B7F15 Triticum aestivum Traes_6BL_4301B7F15 N
TRE_0000162501 Trichobilharzia regenti TRE_0000162501 N
TRE_0000179101 Trichobilharzia regenti TRE_0000179101 N
TRE_0000385401 Trichobilharzia regenti TRE_0000385401 N
TTAC_0000146101 Hydatigera taeniaeformis TTAC_0000146101 N
VAX1 Loxodonta africana ENSLAFG00000018107 N
VAX2 Sus scrofa ENSSSCG00000008318 N
WUBG_03180 Wuchereria bancrofti WUBG_03180 N
WUBG_09511 Wuchereria bancrofti WUBG_09511 N
YQE_10731 Dendroctonus ponderosae YQE_10731 N
YQE_12889 Dendroctonus ponderosae YQE_12889 N