CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J15413
(
Panicum virgatum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Pavir.J15413
T247235_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J15413.1.p
LOB
1
104
FLRRRCVPGCVFAPHFGGGGVREHGAGAGAGAAQFAAVHKVFGASNVAKMLSRVPVALRRDAASTVCYEAQARIADPVYGCVGTILALQHQVALVQAELSIAQT
Links
Other
LOB
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
XP_002154190.1
Hydra magnipapillata
XP_002154190.1
N
XP_002154452.1
Hydra magnipapillata
XP_002154452.1
N
XP_002154597.1
Hydra magnipapillata
XP_002154597.1
N
XP_002156521.1
Hydra magnipapillata
XP_002156521.1
N
XP_002157989.1
Hydra magnipapillata
XP_002157989.1
N
XP_002162636.1
Hydra magnipapillata
XP_002162636.1
N
XP_002162660.1
Hydra magnipapillata
XP_002162660.1
N
XP_002163598.1
Hydra magnipapillata
XP_002163598.1
N
XP_002166056.1
Hydra magnipapillata
XP_002166056.1
N
XP_002166538.1
Hydra magnipapillata
XP_002166538.1
N
XP_002167072.1
Hydra magnipapillata
XP_002167072.1
N
XP_002167685.1
Hydra magnipapillata
XP_002167685.1
N
XP_002167688.1
Hydra magnipapillata
XP_002167688.1
N
XP_002170503.1
Hydra magnipapillata
XP_002170503.1
N
XP_002170627.1
Hydra magnipapillata
XP_002170627.1
N
XP_002170962.1
Hydra magnipapillata
XP_002170962.1
N