Bo6g075950 (Brassica oleracea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bo6g075950 T247992_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.965 0.857
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.965 0.857
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g075950.1 MADF 37 123

Links

Other MADF family TFs
Other Brassica oleracea TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
10438_YHL009C Saccharomyces paradoxus 10438_YHL009C I
23273_YHL009C Saccharomyces bayanus 23273_YHL009C I
9588_YHL009C Saccharomyces mikatae 9588_YHL009C I
BN7_4345 Wickerhamomyces ciferrii BN7_4345 I
CAGL0K02585g Candida glabrata CAGL0K02585g I
CAGL0M10087g Candida glabrata CAGL0M10087g I
CANTEDRAFT_114901 Candida tenuis CANTEDRAFT_114901 I
COCC4DRAFT_125759 Bipolaris maydis COCC4DRAFT_125759 I
COCCADRAFT_29461 Bipolaris zeicola COCCADRAFT_29461 I
COCMIDRAFT_108054 Bipolaris oryzae COCMIDRAFT_108054 I
COCSADRAFT_86485 Bipolaris sorokiniana COCSADRAFT_86485 I
COCVIDRAFT_20419 Bipolaris victoriae COCVIDRAFT_20419 I
COCVIDRAFT_30018 Bipolaris victoriae COCVIDRAFT_30018 I
CORT_0E05690 Candida orthopsilosis CORT_0E05690 I
CPAG_03328 Candida parapsilosis CPAG_03328 I
CTRG_05304 Candida tropicalis CTRG_05304 I
DEHA2E11616g Debaryomyces hansenii DEHA2E11616g I
Ecym_2430 Eremothecium cymbalariae Ecym_2430 I
estExt_fgeneshPB_pg.C_10616 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_10616 I
estExt_Genewise1Plus.C_40021 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_40021 I
e_gw1.00771.352.1 Aspergillus carbonarius e_gw1.00771.352.1 I
G210_3388 Candida maltosa G210_3388 I
GLOINDRAFT_44500 Rhizophagus irregularis GLOINDRAFT_44500 I
HPODL_01491 Ogataea parapolymorpha HPODL_01491 N
KLTH0D05918g Kluyveromyces thermotolerans KLTH0D05918g I
KLTH0D05918g Lachancea thermotolerans KLTH0D05918g I
KNAG_0C05680 Kazachstania naganishii KNAG_0C05680 I
Kwal_7848 Kluyveromyces waltii Kwal_7848 N
LALA0_S02e02388g Lachancea lanzarotensis LALA0_S02e02388g N
LEMA_P113690.1 Leptosphaeria maculans LEMA_P113690.1 I
NCAS_0A05020 Naumovozyma castellii NCAS_0A05020 N
NCAS_0A12530 Naumovozyma castellii NCAS_0A12530 I
PAAG_05122 Paracoccidioides sp lutzii PAAG_05122 I
PTRG_07150 Pyrenophora triticirepentis PTRG_07150 I
PTT_08596 Pyrenophora teres PTT_08596 I
SAKL0E02420g Lachancea kluyveri SAKL0E02420g I
Scas_Contig668.25 Saccharomyces castellii Scas_Contig668.25 N
Scas_Contig673.3 Saccharomyces castellii Scas_Contig673.3 I
SETTUDRAFT_111603 Setosphaeria turcica SETTUDRAFT_111603 I
SNOG_00166 Phaeosphaeria nodorum SNOG_00166 I
SNOG_00166 Stagonospora nodorum SNOG_00166 I
SU7_1398 Saccharomyces arboricola SU7_1398 I
TBLA_0I00300 Tetrapisispora blattae TBLA_0I00300 I
UCRNP2_115 Neofusicoccum parvum UCRNP2_115 I
YAP3 Saccharomyces cerevisiae YHL009C D