Bra007407 (Brassica rapa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bra007407 T248014_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.952 0.800
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.952 0.800
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra007407.1-P MADF 37 129

Links

Other MADF family TFs
Other Brassica rapa TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_01837 Exophiala aquamarina A1O9_01837 I 0.000
ANIA_06846 Aspergillus nidulans CADANIAG00007644 D 0.000
AUEXF2481DRAFT_456199 Aureobasidium subglaciale AUEXF2481DRAFT_456199 I 0.000
CADAFLAG00012297 Aspergillus flavus CADAFLAG00012297 I 0.000
CADAORAG00004258 Aspergillus oryzae CADAORAG00004258 I 0.000
CFIO01_03805 Colletotrichum fioriniae CFIO01_03805 I 0.000
CGGC5_3013 Colletotrichum gloeosporioides CGGC5_3013 I 0.000
Cob_02984 Colletotrichum orbiculare Cob_02984 I 0.000
CSUB01_02738 Colletotrichum sublineola CSUB01_02738 I 0.000
DOTSEDRAFT_71818 Dothistroma septosporum DOTSEDRAFT_71818 N 0.000
estExt_Genewise1Plus.C_chr_50835 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_50835 N 0.000
F503_01249 Ophiostoma piceae uamh F503_01249 I 0.000
FFUJ_09498 Fusarium fujikuroi FFUJ_09498 N 0.000
fgenesh1_pg.C_chr_6.1000096 Pichia stipitis fgenesh1_pg.C_chr_6.1000096 I 0.000
FGRRES_16159 Fusarium graminearum FGRRES_16159 N 0.000
FOXG_11581 Fusarium oxysporum FOXG_11581 N 0.000
FPSE_05211 Fusarium pseudograminearum FPSE_05211 N 0.000
FVEG_10243 Fusarium verticillioides FVEG_10243 N 0.000
GLRG_09907 Colletotrichum graminicola GLRG_09907 I 0.000
gw1.11.59.1 Mycosphaerella fijiensis gw1.11.59.1 N 0.000
M438DRAFT_344531 Aureobasidium pullulans M438DRAFT_344531 I 0.000
MAC_02441 Metarhizium acridum MAC_02441 I 0.000
MANI_013399 Metarhizium anisopliae MANI_013399 N 0.000
MBM_00253 Marssonina brunnea MBM_00253 I 0.000
MBR_05903 Metarhizium brunneum MBR_05903 N 0.000
MGG_06778 Magnaporthe oryzae MGG_06778 N 0.000
MGU_06573 Metarhizium guizhouense MGU_06573 N 0.000
MYCFIDRAFT_142135 Pseudocercospora fijiensis MYCFIDRAFT_142135 N 0.000
Mycgr3G72224 Zymoseptoria tritici Mycgr3G72224 N 0.000
PABG_05542 Paracoccidioides brasiliensis PABG_05542 N 0.000
PICST_32615 Scheffersomyces stipitis PICST_32615 I 0.000
PV05_03582 Exophiala xenobiotica PV05_03582 I 0.000
PVAR5_5942 Byssochlamys spectabilis PVAR5_5942 I 0.000
SEPMUDRAFT_157964 Sphaerulina musiva SEPMUDRAFT_157964 N 0.000
VDAG_00765 Verticillium dahliae VDAG_00765 I 0.000
VDBG_01161 Verticillium alfalfae VDBG_01161 I 0.000
VDBG_01161 Verticillium albo atrum VDBG_01161 I 0.000
VHEMI02369 Torrubiella hemipterigena VHEMI02369 N 0.000
X797_005648 Metarhizium robertsii X797_005648 N 0.000
Z519_01437 Cladophialophora bantiana Z519_01437 I 0.000