CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG154610
(
Lottia gigantea
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
LotgiG154610
T249333_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP154610
MADF
47
134
VIDWLKDNPFIYAKRLTDYKDSQKKEKQWEDKAADMRVEVADLKTFYKSNRTKMTRIKRTVGKSGDSAETVEDLSATDNWVWEKFSFI
Links
Other
MADF
family TFs
Other
Lottia gigantea
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1Plus.C_80059
Phytophthora capsici
estExt_Genewise1Plus.C_80059
N
F443_19407
Phytophthora parasitica
F443_19407
N
HpaG808021
Hyaloperonospora arabidopsidis
HpaG808021
N
maker-pag1_scaffold_133-snap-gene-0.27
Pythium aphanidermatum
maker-pag1_scaffold_133-snap-gene-0.27
N
maker-par_contig_5272-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_5272-fgenesh-gene-0.0
N
maker-pir_contig_1-snap-gene-0.31
Pythium irregulare
maker-pir_contig_1-snap-gene-0.31
N
maker-piw_contig_1600-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_1600-fgenesh-gene-0.0
N
maker-pve_contig_217-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_217-fgenesh-gene-0.1
N
Phyra79259
Phytophthora ramorum
Phyra79259
N
PYU1_G004433
Pythium ultimum
PYU1_G004433
N
SPRG_01076
Saprolegnia parasitica
SPRG_01076
N