OGLUM04G11230 (Oryza glumaepatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OGLUM04G11230 T249545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.850 0.620
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.850 0.620
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.850 0.620
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM04G11230.1 MADF 105 182

Links

Other MADF family TFs
Other Oryza glumaepatula TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10015908 Chelonia mydas Cmyd_10015908 N
ENSAMEG00000009841 Ailuropoda melanoleuca ENSAMEG00000009841 N
ENSBTAP00000034011-D1 Bos grunniens ENSBTAP00000034011-D1 N
ENSMPUG00000006974 Mustela putorius furo ENSMPUG00000006974 N
ENSOARG00000012818 Ovis aries ENSOARG00000012818 N
ENSSTOG00000010776 Ictidomys tridecemlineatus ENSSTOG00000010776 N
HES3 Bos taurus ENSBTAG00000024525 N
HES3 Dasypus novemcinctus ENSDNOG00000032069 N
HES3 Loxodonta africana ENSLAFG00000006355 N
HES3 Myotis lucifugus ENSMLUG00000014815 N
HES3 Oryctolagus cuniculus ENSOCUG00000028151 N
HES3 Sus scrofa ENSSSCG00000003370 N
Myotis_brandtii_HES3_10024028 Myotis brandtii Myotis_brandtii_HES3_10024028 N
Ogr14760 Ophisaurus gracilis Ogr14760 N