Traes_2BL_83EDE2CBB (Triticum aestivum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Traes_2BL_83EDE2CBB T249962_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.847 0.557
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.847 0.557
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.847 0.557
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2BL_83EDE2CBB.1 MADF 126 202

Links

Other MADF family TFs
Other Triticum aestivum TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16490_YMR021C Saccharomyces mikatae 16490_YMR021C I
17243_Multiple Saccharomyces paradoxus 17243_Multiple I
17660_YMR021C Saccharomyces bayanus 17660_YMR021C I
AACERI_AaceriABR058C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR058C I
AGOS_ABR058C Ashbya gossypii AGOS_ABR058C I
BN7_1778 Wickerhamomyces ciferrii BN7_1778 N
Ecym_4579 Eremothecium cymbalariae Ecym_4579 I
JL09_g1323 Pichia kudriavzevii JL09_g1323 N
KAFR_0A02150 Kazachstania africana KAFR_0A02150 I
KLLA0_E07767g Kluyveromyces lactis KLLA0_E07767g I
KLTH0D07964g Kluyveromyces thermotolerans KLTH0D07964g I
KNAG_0M02140 Kazachstania naganishii KNAG_0M02140 I
Kpol_1056p6 Vanderwaltozyma polyspora Kpol_1056p6 I
Kwal_8219 Kluyveromyces waltii Kwal_8219 I
LALA0_S02e00540g Lachancea lanzarotensis LALA0_S02e00540g I
MAC1 Saccharomyces cerevisiae YMR021C D
NCAS_0A03700 Naumovozyma castellii NCAS_0A03700 I
NDAI_0C06080 Naumovozyma dairenensis NDAI_0C06080 I
PAS_chr3_0923 Komagataella pastoris PAS_chr3_0923 I
SAKL0D13530g Lachancea kluyveri SAKL0D13530g I
Scas_Contig576.5 Saccharomyces castellii Scas_Contig576.5 I
SU7_2507 Saccharomyces arboricola SU7_2507 I
TDEL_0B06560 Torulaspora delbrueckii TDEL_0B06560 I
TPHA_0I02450 Tetrapisispora phaffii TPHA_0I02450 I
XP_002493160.1 Pichia pastoris XP_002493160.1 I
ZYRO0E06336g Zygosaccharomyces rouxii ZYRO0E06336g I