cassava47424.m1 (Manihot esculenta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 cassava47424.m1 T250475_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.823 0.718
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava47424.m1 MADF 11 88

Links

Other MADF family TFs
Other Manihot esculenta TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001830 Calypte anna Aan_R001830 N 0.000
Aan_R005501 Calypte anna Aan_R005501 N 0.000
DAPPUDRAFT_207089 Daphnia pulex DAPPUDRAFT_207089 N 0.000
ENSAMEG00000018175 Ailuropoda melanoleuca ENSAMEG00000018175 N 0.000
ENSAPLG00000009927 Anas platyrhynchos ENSAPLG00000009927 N 0.000
ENSCJAG00000006943 Callithrix jacchus ENSCJAG00000006943 N 0.000
ENSCSAG00000008875 Chlorocebus sabaeus ENSCSAG00000008875 N 0.000
ENSFALG00000000117 Ficedula albicollis ENSFALG00000000117 N 0.000
ENSGGOG00000011764 Gorilla gorilla ENSGGOG00000011764 N 0.000
ENSMLUG00000007019 Myotis lucifugus ENSMLUG00000007019 N 0.000
ENSMMUG00000009047 Macaca mulatta ENSMMUG00000009047 N 0.000
ENSMMUP00000033662 Macaca fascicularis ENSMMUP00000033662 N 0.000
ENSMPUG00000012200 Mustela putorius furo ENSMPUG00000012200 N 0.000
ENSNLEG00000012726 Nomascus leucogenys ENSNLEG00000012726 N 0.000
ENSOARG00000004235 Ovis aries ENSOARG00000004235 N 0.000
ENSP00000389716-D1 Bos grunniens ENSP00000389716-D1 N 0.000
ENSPANG00000007888 Papio anubis ENSPANG00000007888 N 0.000
mxd1 Danio rerio ENSDARG00000032039 N 0.000
mxd1 Xenopus tropicalis XB-GENE-943715 N 0.000
MXD1 Myotis lucifugus ENSMLUG00000016646 N 0.000
mxd1.L Xenopus laevis XB-GENE-943720 N 0.000
MXD3 Tursiops truncatus ENSTTRG00000009572 N 0.000
MXD3 Bos taurus ENSBTAG00000005010 N 0.000
MXD3 Canis familiaris ENSCAFG00000016437 N 0.000
mxd3 Xenopus tropicalis XB-GENE-867571 N 0.000
MXD3 Dasypus novemcinctus ENSDNOG00000017403 N 0.000
MXD3 Equus caballus ENSECAG00000021155 N 0.000
MXD3 Erinaceus europaeus ENSEEUG00000015798 N 0.000
MXD3 Echinops telfairi ENSETEG00000010972 N 0.000
Mxd3 Mus musculus ENSMUSG00000021485 N 0.000
MXD3 Sus scrofa ENSSSCG00000014041 N 0.000
MXD3 Pteropus vampyrus ENSPVAG00000003828 N 0.000
MXD3 Pan troglodytes ENSPTRG00000034491 N 0.000
MXD3 Felis catus ENSFCAG00000001533 N 0.000
MXD3 Ochotona princeps ENSOPRG00000002125 N 0.000
MXD3 Oryctolagus cuniculus ENSOCUG00000022519 N 0.000
MXD3 Homo sapiens ENSG00000213347 N 0.000
MXD3 Loxodonta africana ENSLAFG00000021836 N 0.000
mxd3.L Xenopus laevis XB-GENE-867580 N 0.000
Myotis_brandtii_Mxd1_10023164 Myotis brandtii Myotis_brandtii_Mxd1_10023164 N 0.000
Myotis_brandtii_MXD3_10032506 Myotis brandtii Myotis_brandtii_MXD3_10032506 N 0.000
Rab24 Rattus norvegicus ENSRNOG00000016539 N 0.000