SapurV1A.0226s0070 (Salix purpurea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SapurV1A.0226s0070 T250843_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.925 0.753
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.925 0.753
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.925 0.753
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.917 0.712
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0226s0070.1.p MADF 112 187
SapurV1A.0226s0070.2.p MADF 112 187
SapurV1A.0226s0070.3.p MADF 112 187

Links

Other MADF family TFs
Other Salix purpurea TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_06368 Aegilops tauschii F775_06368 N
MLOC_53538 Hordeum vulgare MLOC_53538 N
Traes_4AL_F75EDC0121 Triticum aestivum Traes_4AL_F75EDC0121 N
Traes_4DS_998201C4C Triticum aestivum Traes_4DS_998201C4C N