Thhalv10020471m.g (Eutrema salsugineum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Thhalv10020471m.g T250873_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.967 0.932
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.967 0.932
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.967 0.932
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.944 0.797
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10020471m MADF 160 241
Thhalv10020477m MADF 160 241

Links

Other MADF family TFs
Other Eutrema salsugineum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_01187 Exophiala aquamarina A1O9_01187 N
BDDG_02000 Blastomyces dermatitidis BDDG_02000 I
CCM_03124 Cordyceps militaris CCM_03124 N
e_gw1.39.182.1 Nectria haematococca e_gw1.39.182.1 N
FFUJ_02119 Fusarium fujikuroi FFUJ_02119 N
FGRRES_03207_M Fusarium graminearum FGRRES_03207_M N
FOXG_15235 Fusarium oxysporum FOXG_15235 N
FPSE_05968 Fusarium pseudograminearum FPSE_05968 N
FVEG_12534 Fusarium verticillioides FVEG_12534 N
HCBG_00538 Histoplasma capsulatum HCBG_00538 I
HMPREF1120_04439 Exophiala dermatitidis HMPREF1120_04439 N
NechaG52568 Fusarium solani NechaG52568 N
PAAG_05745 Paracoccidioides sp lutzii PAAG_05745 I
PFICI_10661 Pestalotiopsis fici PFICI_10661 N
Z518_06607 Rhinocladiella mackenziei Z518_06607 N