ACOC_0000053701 (Angiostrongylus costaricensis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 ACOC_0000053701 T251762_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
madf-9
M02277_2.00 		Caenorhabditis elegans
VYGCGGAH
DTCCGCRB		 PBM
Weirauch et al.(2014)
pTH8333 		0.932 0.684
CBG08311
M02267_2.00 		Caenorhabditis briggsae
RCGCGGAM
KTCCGCGY		 PBM
Weirauch et al.(2014)
pTH9393 		0.930 0.671
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000053701-mRNA-1 MADF 49 127

Links

Other MADF family TFs
Other Angiostrongylus costaricensis TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G02400 Brachypodium distachyon BRADI1G02400 N
LPERR03G34400 Leersia perrieri LPERR03G34400 N
OB03G47430 Oryza brachyantha OB03G47430 N
Traes_4AL_BA5E3C62A Triticum aestivum Traes_4AL_BA5E3C62A N
Traes_5BL_A78049B06 Triticum aestivum Traes_5BL_A78049B06 N
Traes_5DL_D0E16F980 Triticum aestivum Traes_5DL_D0E16F980 N
TRIUR3_12762 Triticum urartu TRIUR3_12762 N