CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0001669701
(
Gongylonema pulchrum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
GPUH_0001669701
T251992_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0001669701-mRNA-1
MADF
2
64
DSASRSPAANLERNKIWRQITEEINKKYSHLNTLTYEQCKKLCKYYKRKDPTNYGIAFHSMHG
GPUH_0001669701-mRNA-1
MADF
236
315
CKLAENFNGVFDSHSRLYHINAERNQVWKQITDTANEKFGAELGDLTIEQTKKLYANYRRKSQAPSFGSATSTGEMLRSE
Links
Other
MADF
family TFs
Other
Gongylonema pulchrum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0001079501
Ascaris lumbricoides
ALUE_0001079501
N
0.907
ASIM_0001260501
Anisakis simplex
ASIM_0001260501
N
0.864
ASU_14704
Ascaris suum
ASU_14704
N
0.902
Bm5816
Brugia malayi
Bm5816
N
0.931
EEL_0000883101
Elaeophora elaphi
EEL_0000883101
N
0.942
GPUH_0001626001
Gongylonema pulchrum
GPUH_0001626001
N
0.970
LOAG_16891
Loa loa
LOAG_16891
N
0.940
nDi.2.2.2.g06980
Dirofilaria immitis
nDi.2.2.2.g06980
N
0.931
nLs.2.1.2.g07861
Litomosoides sigmodontis
nLs.2.1.2.g07861
N
0.930
nOo.2.0.1.g05192
Onchocerca ochengi
nOo.2.0.1.g05192
N
0.958
TCLT_0000250801
Thelazia callipaeda
TCLT_0000250801
N
0.958
WBGene00246018
Onchocerca volvulus
WBGene00246018
N
0.958