CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf03712-augustus-gene-0.9
(
Meloidogyne floridensis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
maker-nMf.1.1.scaf03712-augustus-gene-0.9
T252277_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf03712-augustus-gene-0.9-mRNA-1
MADF
12
104
LIQEYKKYPCLWSSRDEDIKNVEKRRECLTLITTELNKYEERPFSQDEIRTQFKNLRDMYRRKRKRLQSQQEINPGVVLDEPGWIYFNRLKFL
Links
Other
MADF
family TFs
Other
Meloidogyne floridensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000301100
Globodera pallida
GPLIN_000301100
N
0.912
maker-nMf.1.1.scaf08010-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf08010-augustus-gene-0.3
N
0.968
MhA1_Contig1361.frz3.gene7
Meloidogyne hapla
MhA1_Contig1361.frz3.gene7
N
0.967
Minc01234
Meloidogyne incognita
Minc01234
N
0.971