CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo8g104960
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo8g104960
T253191_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo8g104960.1
MADS box
52
99
EIKEDSKRHVTFSKRRRGLFKKAAELSVLTGAKIAVVTFSKCGRIYSF
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA015201
Oryza indica
BGIOSGA015201
N
GRMZM2G126194
Zea mays
GRMZM2G126194
N
LPERR04G06900
Leersia perrieri
LPERR04G06900
N
OGLUM04G10060
Oryza glumaepatula
OGLUM04G10060
N
OMERI04G09500
Oryza meridionalis
OMERI04G09500
N
ONIVA04G08240
Oryza nivara
ONIVA04G08240
N
OPUNC04G08500
Oryza punctata
OPUNC04G08500
N
ORGLA02G0343600
Oryza glaberrima
ORGLA02G0343600
N
ORGLA04G0074500
Oryza glaberrima
ORGLA04G0074500
N
ORUFI04G11550
Oryza rufipogon
ORUFI04G11550
N
OS04G0386900
Oryza sativa
OS04G0386900
N
Pavir.J18471
Panicum virgatum
Pavir.J18471
N
Si012575m.g
Setaria italica
Si012575m.g
N