CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra026674
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra026674
T253327_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra026674.1-P
MADS box
52
99
EIKEDSKRHVTFSKRRRGLFKKAAELSVLTGAKIAVVTFSKCGRIYSF
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10015908
Chelonia mydas
Cmyd_10015908
N
ENSAMEG00000009841
Ailuropoda melanoleuca
ENSAMEG00000009841
N
ENSBTAP00000034011-D1
Bos grunniens
ENSBTAP00000034011-D1
N
ENSMPUG00000006974
Mustela putorius furo
ENSMPUG00000006974
N
ENSOARG00000012818
Ovis aries
ENSOARG00000012818
N
ENSSTOG00000010776
Ictidomys tridecemlineatus
ENSSTOG00000010776
N
HES3
Bos taurus
ENSBTAG00000024525
N
HES3
Dasypus novemcinctus
ENSDNOG00000032069
N
HES3
Loxodonta africana
ENSLAFG00000006355
N
HES3
Myotis lucifugus
ENSMLUG00000014815
N
HES3
Oryctolagus cuniculus
ENSOCUG00000028151
N
HES3
Sus scrofa
ENSSSCG00000003370
N
Myotis_brandtii_HES3_10024028
Myotis brandtii
Myotis_brandtii_HES3_10024028
N
Ogr14760
Ophisaurus gracilis
Ogr14760
N