COCVIDRAFT_17132 (Bipolaris victoriae)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 COCVIDRAFT_17132 T253518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.750 0.750
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUN25713 MADS box 10 57

Links

Other MADS box family TFs
Other Bipolaris victoriae TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I
ENSMICG00000012090 Microcebus murinus ENSMICG00000012090 I
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I
irf10 Xenopus tropicalis XB-GENE-1033046 I
Irf4 Mus musculus ENSMUSG00000021356 D
Irf4 Rattus norvegicus ENSRNOG00000061070 I
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I
irf4b Gasterosteus aculeatus ENSGACG00000004966 I
irf4b Oryzias latipes ENSORLG00000012712 I
irf4b Takifugu rubripes ENSTRUG00000002946 I
IRF8 Homo sapiens ENSG00000140968 D
IRF8 Vicugna pacos ENSVPAG00000006643 I
IRF8 Otolemur garnettii ENSOGAG00000009262 I
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I
Irf8 Mus musculus ENSMUSG00000041515 D
irf8.L Xenopus laevis XB-GENE-985949 I
Ogr05775 Ophisaurus gracilis Ogr05775 I