GRMZM2G005155 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GRMZM2G005155 T254265_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.750 0.750
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.708 0.708
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.708 0.708
AGL42
M06995_2.00 		Arabidopsis thaliana
RATGATG
CATCATY		 Dap-seq
OMalley et al.(2016)
AGL42_col_a 		0.708 0.708
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G005155_P01 MADS box 10 57
GRMZM2G005155_P02 MADS box 10 57
GRMZM2G005155_P03 MADS box 10 57

Links

Other MADS box family TFs
Other Zea mays TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB004300 Anopheles albimanus AALB004300 I
AARA000887 Anopheles arabiensis AARA000887 I
AATE006511 Anopheles atroparvus AATE006511 I
ACOM039838 Anopheles coluzzii ACOM039838 I
ACUA004794 Anopheles culicifacies ACUA004794 I
ADAC004162 Anopheles darlingi ADAC004162 I
ADIR007438 Anopheles dirus ADIR007438 I
AEPI005427 Anopheles epiroticus AEPI005427 I
AFAF017409 Anopheles farauti AFAF017409 I
AFUN000141 Anopheles funestus AFUN000141 I
AMEM018156 Anopheles merus AMEM018156 I
AMIN007990 Anopheles minimus AMIN007990 I
AQUA000938 Anopheles quadriannulatus AQUA000938 I
ASIS001542 Anopheles sinensis ASIS001542 I
ASTEI09431 Anopheles stephensi ASTEI09431 I
CGI_10003797 Crassostrea gigas CGI_10003797 N
CGI_10008414 Crassostrea gigas CGI_10008414 I
CpipJ_CPIJ014920 Culex pipiens CpipJ_CPIJ014920 I
ENSAMXG00000008798 Astyanax mexicanus ENSAMXG00000008798 I
ENSAMXG00000015442 Astyanax mexicanus ENSAMXG00000015442 I
ENSGMOG00000014488 Gadus morhua ENSGMOG00000014488 I
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I
e_gw.24.282.1 Branchiostoma floridae e_gw.24.282.1 I
e_gw.273.32.1 Branchiostoma floridae e_gw.273.32.1 I
e_gw.273.54.1 Branchiostoma floridae e_gw.273.54.1 I
GA28498 Drosophila pseudoobscura FBgn0249858 I
GD13032 Drosophila simulans FBgn0184754 I
GE20386 Drosophila yakuba FBgn0237702 I
GF24150 Drosophila ananassae FBgn0101144 I
GG14935 Drosophila erecta FBgn0107189 I
GH23565 Drosophila grimshawi FBgn0131022 I
GI12193 Drosophila mojavensis FBgn0134950 I
GJ11425 Drosophila virilis FBgn0198683 I
GK10510 Drosophila willistoni FBgn0212525 I
GL17823 Drosophila persimilis FBgn0155426 I
GM24985 Drosophila sechellia FBgn0179846 I
hlfa Oryzias latipes ENSORLG00000000969 I
ISCW004978 Ixodes scapularis ISCW004978 I
LCUP014933 Lucilia cuprina LCUP014933 I
LLOJ006612 Lutzomyia longipalpis LLOJ006612 I
MDOA003519 Musca domestica MDOA003519 I
Ogr00037 Ophisaurus gracilis Ogr00037 I
PDP1 Aedes aegypti AAEL005255 I
Pdp1 Drosophila melanogaster FBgn0016694 D
PDP1 Culex quinquefasciatus CPIJ014920 I
PDP1 Anopheles gambiae AGAP006376 I
PPAI002842 Phlebotomus papatasi PPAI002842 I
SMAR002779 Strigamia maritima SMAR002779 I
Tef Rattus norvegicus ENSRNOG00000019383 I
TEF Canis familiaris ENSCAFG00000001095 I
tef/hlf Ciona intestinalis ENSCING00000002295 N
tefa Danio rerio ENSDARG00000039117 I
tefb Takifugu rubripes ENSTRUG00000003565 I
tefb Gasterosteus aculeatus ENSGACG00000007628 I
tefb Danio rerio ENSDARG00000098103 I