CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G038878
(
Zea mays
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GRMZM2G038878
T254272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G038878_P01
MADS box
10
54
RIENRVSRHVTFFSKRRKGLLNLAVLCDVDVGVGVFSERGKVFQY
Links
Other
MADS box
family TFs
Other
Zea mays
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036149
Oryza indica
BGIOSGA036149
I
0.705
Cucsa.251170
Cucumis sativus
Cucsa.251170
I
0.705
GRMZM2G161666
Zea mays
GRMZM2G161666
I
0.841
LPERR12G10770
Leersia perrieri
LPERR12G10770
I
0.705
MADS20
Oryza sativa
OS12G0501700
I
0.705
OBART12G13000
Oryza barthii
OBART12G13000
I
0.705
OGLUM12G14590
Oryza glumaepatula
OGLUM12G14590
I
0.705
OLONG_028574
Oryza longistaminata
OLONG_028574
I
0.705
OMERI12G08970
Oryza meridionalis
OMERI12G08970
I
0.705
ONIVA12G13220
Oryza nivara
ONIVA12G13220
I
0.705
ORGLA12G0116000
Oryza glaberrima
ORGLA12G0116000
I
0.705
ORUFI12G14120
Oryza rufipogon
ORUFI12G14120
I
0.705
Pavir.Db00414
Panicum virgatum
Pavir.Db00414
I
0.841
Pavir.J10823
Panicum virgatum
Pavir.J10823
I
0.864
Sb10g026690
Sorghum bicolor
Sb10g026690
I
0.841
Si007187m.g
Setaria italica
Si007187m.g
I
0.886