NDAI_0E02700 (Naumovozyma dairenensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 NDAI_0E02700 T254863_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.896 0.896
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.896 0.896
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.875 0.875
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCD25087 MADS box 10 57

Links

Other MADS box family TFs
Other Naumovozyma dairenensis TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005839 Oryza indica BGIOSGA005839 N 0.000
BGIOSGA014504 Oryza indica BGIOSGA014504 N 0.000
BRADI5G19190 Brachypodium distachyon BRADI5G19190 N 0.000
GRMZM2G109869 Zea mays GRMZM2G109869 N 0.000
GRMZM2G173429 Zea mays GRMZM2G173429 N 0.000
LPERR04G18520 Leersia perrieri LPERR04G18520 N 0.000
MLOC_72117 Hordeum vulgare MLOC_72117 N 0.000
OB04G29620 Oryza brachyantha OB04G29620 N 0.000
OBART02G28020 Oryza barthii OBART02G28020 N 0.000
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N 0.000
OGLUM04G22640 Oryza glumaepatula OGLUM04G22640 N 0.000
OMERI02G27200 Oryza meridionalis OMERI02G27200 N 0.000
OMERI04G19030 Oryza meridionalis OMERI04G19030 N 0.000
ONIVA02G31120 Oryza nivara ONIVA02G31120 N 0.000
ONIVA04G21910 Oryza nivara ONIVA04G21910 N 0.000
OPUNC02G25720 Oryza punctata OPUNC02G25720 N 0.000
OPUNC04G20350 Oryza punctata OPUNC04G20350 N 0.000
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N 0.000
ORGLA04G0197700 Oryza glaberrima ORGLA04G0197700 N 0.000
ORUFI02G29540 Oryza rufipogon ORUFI02G29540 N 0.000
ORUFI04G24440 Oryza rufipogon ORUFI04G24440 N 0.000
OS02G0681900 Oryza sativa OS02G0681900 N 0.000
OS04G0580300 Oryza sativa OS04G0580300 N 0.000
Pavir.Ga00626 Panicum virgatum Pavir.Ga00626 N 0.000
Pavir.Gb01009 Panicum virgatum Pavir.Gb01009 N 0.000
Pavir.J39953 Panicum virgatum Pavir.J39953 N 0.000
Sb06g026240 Sorghum bicolor Sb06g026240 N 0.000
Si016627m.g Setaria italica Si016627m.g N 0.000
Traes_2BL_46E59998A1 Triticum aestivum Traes_2BL_46E59998A1 N 0.000