OMERI06G00470 (Oryza meridionalis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OMERI06G00470 T255186_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.792 0.792
AG
M02695_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHADN
NHTDCCHNWTWWGGWAAD		 SELEX
Mathelier et al.(2014)
MA0005.2 		0.771 0.771
AG
M10923_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN
NHTDCCHNWTWWGGWAAD		 Transfac
Matys et al.(2006)
P$AG_01 		0.771 0.771
AG
M10924_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_02 		0.771 0.771
AG
M10925_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_03 		0.771 0.771
AG_TOBAC
M10995_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG1_02 		0.771 0.771
AG
M10926_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_Q2 		0.771 0.771
Q08711_PETHY
M10999_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP6_01 		0.771 0.771
Q8VWZ3_MALDO
M11025_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS14_02 		0.771 0.771
Q8VWZ2_MALDO
M11024_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_02 		0.771 0.771
MADS3_ORYSJ
M10963_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_01 		0.771 0.771
AG_PETHY
M10994_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_02 		0.771 0.771
AGL1
M02694_2.00 		Arabidopsis thaliana
NDTDCCWWWWNDGGWAHN
NDTWCCHNWWWWGGHAHN		 SELEX
Mathelier et al.(2014)
MA0585.1 		0.750 0.750
AGL1
M10920_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL1_01 		0.750 0.750
AGL1
M10921_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL1_02 		0.750 0.750
Q9ATE8_PETHY
M11011_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP21_01 		0.750 0.750
O82698_MALDO
M11021_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS10_01 		0.750 0.750
Q40591_TOBAC
M11002_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_03 		0.750 0.750
MADS5
M10970_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS5_02 		0.750 0.750
SHP2
M10914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SHP2_01 		0.750 0.750
AGL6
M06986_2.00 		Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA		 Dap-seq
OMalley et al.(2016)
AGL6_col_a 		0.729 0.729
squamosa
M02697_2.00 		Antirrhinum majus
MYAWAWAWRGHAAN
NTTDCYWTWTWTRK		 SELEX
Mathelier et al.(2014)
MA0082.1 		0.729 0.729
SOC1
M08425_2.00 		Arabidopsis thaliana
CCAAAAAWRGAAAND
HNTTTCYWTTTTTGG		 ChIP-chip
Mathelier et al.(2014)
MA0554.1 		0.729 0.729
SOC1
M10915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL20_01 		0.729 0.729
Q9LEI1_HORVU
M10984_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM7_01 		0.729 0.729
Q9LEH9_HORVU
M10983_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM9_01 		0.729 0.729
Q40882_PETHY
M11003_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP11_01 		0.729 0.729
Q9ATE9_PETHY
M11012_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP20_01 		0.729 0.729
Q9ATE7_PETHY
M11010_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP22_01 		0.729 0.729
Q9ATE3_PETHY
M11008_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP28_01 		0.729 0.729
MADS1
M10969_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_02 		0.729 0.729
MAD17_ORYSJ
M10961_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS17_01 		0.729 0.729
MADS6
M10967_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS6_01 		0.729 0.729
Q38742_ANTMA
M11000_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SQUA_01 		0.729 0.729
AGL15
M06992_2.00 		Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN
NTTTCYWHWTTDGGWAANW		 Dap-seq
OMalley et al.(2016)
AGL15_col_a 		0.708 0.708
AGL15
M06993_2.00 		Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH
DDNTTTCYHHWTTDGGWAANH		 Dap-seq
OMalley et al.(2016)
AGL15_colamp_a 		0.708 0.708
AGL3
M02693_2.00 		Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN
NNWNCYWWWWWTGGNWHB		 SELEX
Mathelier et al.(2014)
MA0001.2 		0.708 0.708
SEP1
M02696_2.00 		Arabidopsis thaliana
NDWNCCAWWWWTRGHAWB
VWTDCYAWWWWTGGNWHN		 SELEX
Mathelier et al.(2014)
MA0584.1 		0.708 0.708
SEP3
M08143_2.00 		Arabidopsis thaliana
CCAAAAAWRGN
NCYWTTTTTGG		 ChIP-seq
Mathelier et al.(2014)
MA0563.1 		0.708 0.708
AP1
M08144_2.00 		Arabidopsis thaliana
MYAAAAAWRGAAA
TTTCYWTTTTTRK		 ChIP-seq
Mathelier et al.(2014)
MA0940.1 		0.708 0.708
AGL15
M10927_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_01 		0.708 0.708
AGL15
M10928_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_02 		0.708 0.708
SEP1
M10929_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL2_01 		0.708 0.708
SEP1
M10930_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL2_02 		0.708 0.708
AGL3
M10908_2.00 		Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN
NNWNCYWWWWWTGGNWHB		 Transfac
Matys et al.(2006)
P$AGL3_01 		0.708 0.708
AGL3
M10909_2.00 		Arabidopsis thaliana
NDTNCCAWWWWTRGHWNN
NNWDCYAWWWWTGGNAHN		 Transfac
Matys et al.(2006)
P$AGL3_02 		0.708 0.708
AGL3
M10910_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL3_03 		0.708 0.708
SEP2
M10916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL4_01 		0.708 0.708
SEP3
M10902_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL9_01 		0.708 0.708
AGL9_PETHY
M10993_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP2_01 		0.708 0.708
Q9ATE6_PETHY
M11009_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP23_01 		0.708 0.708
Q9ATF3_PETHY
M11015_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP4_01 		0.708 0.708
Q43616_PETHY
M11004_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP7_01 		0.708 0.708
Q9ATF1_PETHY
M11013_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP9_01 		0.708 0.708
O82084_MALDO
M11018_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_01 		0.708 0.708
O82699_MALDO
M11022_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_01 		0.708 0.708
Q6UGQ8_PETHY
M11005_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS12_01 		0.708 0.708
Q9ST54_MALDO
M11029_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_04 		0.708 0.708
Q9LM09_TOBAC
M11016_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS4_01 		0.708 0.708
O82697_MALDO
M11020_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS7_01 		0.708 0.708
MADS7
M10975_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS7_02 		0.708 0.708
MADS8
M10976_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS8_01 		0.708 0.708
Q9SBA6_MALDO
M11028_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS8_02 		0.708 0.708
AP1
M10905_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSA_Q2 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI06G00470.1 MADS box 18 65

Links

Other MADS box family TFs
Other Oryza meridionalis TFs

1126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08709 Capronia coronata A1O1_08709 I 0.000
A1O3_08094 Capronia epimyces A1O3_08094 I 0.000
A1O5_04435 Cladophialophora psammophila A1O5_04435 I 0.000
A1O7_03387 Cladophialophora yegresii A1O7_03387 I 0.000
A1O9_03458 Exophiala aquamarina A1O9_03458 I 0.000
A1O9_12959 Exophiala aquamarina A1O9_12959 I 0.000
ACLA_098160 Aspergillus clavatus CADACLAG00009206 I 0.000
AFUA_6G02330 Aspergillus fumigatus CADAFUAG00000640 I 0.000
AOL_s00004g648 Arthrobotrys oligospora AOL_s00004g648 I 0.000
ARB_01992 Arthroderma benhamiae ARB_01992 I 0.000
ATEG_07219 Aspergillus terreus CADATEAG00001089 I 0.000
AUEXF2481DRAFT_8523 Aureobasidium subglaciale AUEXF2481DRAFT_8523 I 0.000
BBA_07683 Beauveria bassiana BBA_07683 I 0.000
BDDG_07136 Blastomyces dermatitidis BDDG_07136 I 0.000
BGHDH14_bgh05211 Blumeria graminis BGHDH14_bgh05211 I 0.000
CADAFLAG00008794 Aspergillus flavus CADAFLAG00008794 I 0.000
CADANGAG00010285 Aspergillus niger CADANGAG00010285 I 0.000
CCM_06477 Cordyceps militaris CCM_06477 I 0.000
CFIO01_13219 Colletotrichum fioriniae CFIO01_13219 I 0.000
CGGC5_3218 Colletotrichum gloeosporioides CGGC5_3218 I 0.000
CH063_09116 Colletotrichum higginsianum CH063_09116 I 0.000
CIMG_05854 Coccidioides immitis CIMG_05854 I 0.000
Cob_13124 Colletotrichum orbiculare Cob_13124 I 0.000
CPC735_024740 Coccidioides posadasii CPC735_024740 I 0.000
CSUB01_08239 Colletotrichum sublineola CSUB01_08239 I 0.000
DOTSEDRAFT_68063 Dothistroma septosporum DOTSEDRAFT_68063 I 0.000
DRE_07643 Drechslerella stenobrocha DRE_07643 I 0.000
estExt_fgenesh1_pg.C_chr_40524 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_40524 I 0.000
EURHEDRAFT_452525 Aspergillus ruber EURHEDRAFT_452525 I 0.000
e_gw1.2.1505.1 Nectria haematococca e_gw1.2.1505.1 I 0.000
FFUJ_05647 Fusarium fujikuroi FFUJ_05647 I 0.000
fgenesh1_pm.00855_#_114 Aspergillus carbonarius fgenesh1_pm.00855_#_114 I 0.000
FGRRES_08924 Fusarium graminearum FGRRES_08924 I 0.000
FOXG_03656 Fusarium oxysporum FOXG_03656 I 0.000
FOXG_12523 Fusarium oxysporum FOXG_12523 I 0.000
FOXG_14016 Fusarium oxysporum FOXG_14016 I 0.000
FPSE_08907 Fusarium pseudograminearum FPSE_08907 I 0.000
FVEG_02531 Fusarium verticillioides FVEG_02531 I 0.000
G647_04998 Cladophialophora carrionii G647_04998 I 0.000
GGTG_04916 Gaeumannomyces graminis GGTG_04916 I 0.000
GLRG_04619 Colletotrichum graminicola GLRG_04619 I 0.000
GMDG_06896 Pseudogymnoascus destructans GMDG_06896 I 0.000
GSTUM_00012177001 Tuber melanosporum GSTUM_00012177001 I 0.000
H072_5617 Dactylellina haptotyla H072_5617 I 0.000
H101_06341 Trichophyton interdigitale H101_06341 I 0.000
H102_07503 Trichophyton rubrum H102_07503 I 0.000
H105_07531 Trichophyton soudanense H105_07531 I 0.000
HCBG_05620 Histoplasma capsulatum HCBG_05620 D 0.000
HMPREF1120_04468 Exophiala dermatitidis HMPREF1120_04468 I 0.000
HMPREF1541_04403 Cyphellophora europaea HMPREF1541_04403 I 0.000
M437DRAFT_72508 Aureobasidium melanogenum M437DRAFT_72508 I 0.000
M438DRAFT_354465 Aureobasidium pullulans M438DRAFT_354465 I 0.000
MAJ_08136 Metarhizium majus MAJ_08136 I 0.000
MANI_021400 Metarhizium anisopliae MANI_021400 I 0.000
MAPG_10394 Magnaporthe poae MAPG_10394 I 0.000
MBM_09565 Marssonina brunnea MBM_09565 I 0.000
MBR_06549 Metarhizium brunneum MBR_06549 I 0.000
MCYG_00576 Microsporum canis MCYG_00576 I 0.000
MCYG_00576 Arthroderma otae MCYG_00576 I 0.000
MGU_10186 Metarhizium guizhouense MGU_10186 I 0.000
MGYG_01386 Microsporum gypseum MGYG_01386 I 0.000
MPH_04742 Macrophomina phaseolina MPH_04742 I 0.000
MYCFIDRAFT_89500 Pseudocercospora fijiensis MYCFIDRAFT_89500 I 0.000
Mycgr3G109237 Zymoseptoria tritici Mycgr3G109237 I 0.000
NechaG36533 Fusarium solani NechaG36533 I 0.000
NFIA_048590 Neosartorya fischeri CADNFIAG00005471 I 0.000
OIDMADRAFT_116523 Oidiodendron maius OIDMADRAFT_116523 I 0.000
PABG_06482 Paracoccidioides brasiliensis PABG_06482 I 0.000
PDE_03379 Penicillium oxalicum PDE_03379 I 0.000
PDIP_61980 Penicillium digitatum PDIP_61980 I 0.000
PEX1_027650 Penicillium expansum PEX1_027650 I 0.000
PFICI_02807 Pestalotiopsis fici PFICI_02807 I 0.000
PITC_053720 Penicillium italicum PITC_053720 I 0.000
PMAA_018530 Talaromyces marneffei PMAA_018530 I 0.000
PMAA_018530 Penicillium marneffei PMAA_018530 I 0.000
PV04_03585 Capronia semiimmersa PV04_03585 N 0.000
PV05_05708 Exophiala xenobiotica PV05_05708 I 0.000
PV06_02748 Exophiala oligosperma PV06_02748 I 0.000
PV07_06716 Cladophialophora immunda PV07_06716 I 0.000
PV08_11124 Exophiala spinifera PV08_11124 I 0.000
PV09_00253 Verruconis gallopava PV09_00253 I 0.000
PV10_05482 Exophiala mesophila PV10_05482 I 0.000
PV11_00872 Exophiala sideris PV11_00872 I 0.000
PVAR5_6560 Byssochlamys spectabilis PVAR5_6560 I 0.000
SAPIO_CDS5089 Scedosporium apiospermum SAPIO_CDS5089 I 0.000
SEPMUDRAFT_146422 Sphaerulina musiva SEPMUDRAFT_146422 I 0.000
synt_with_mycgr.1__94 Mycosphaerella fijiensis synt_with_mycgr.1__94 I 0.000
TEQG_05447 Trichophyton equinum TEQG_05447 I 0.000
TESG_05799 Trichophyton tonsurans TESG_05799 I 0.000
TRIATDRAFT_35002 Trichoderma atroviride TRIATDRAFT_35002 I 0.000
TRIREDRAFT_76872 Trichoderma reesei TRIREDRAFT_76872 I 0.000
TRIVIDRAFT_126611 Trichoderma virens TRIVIDRAFT_126611 I 0.000
TSTA_026540 Talaromyces stipitatus TSTA_026540 I 0.000
U727_00433250161 Penicillium solitum U727_00433250161 I 0.000
UCRNP2_2338 Neofusicoccum parvum UCRNP2_2338 I 0.000
UV8b_4663 Ustilaginoidea virens UV8b_4663 I 0.000
V499_05047 Pseudogymnoascus pannorum V499_05047 I 0.000
VDAG_10326 Verticillium dahliae VDAG_10326 I 0.000
VDBG_01960 Verticillium albo atrum VDBG_01960 I 0.000
VDBG_01960 Verticillium alfalfae VDBG_01960 I 0.000
VHEMI07137 Torrubiella hemipterigena VHEMI07137 I 0.000
W97_05539 Coniosporium apollinis W97_05539 I 0.000
X797_010723 Metarhizium robertsii X797_010723 I 0.000
YALI0_F15037g Yarrowia lipolytica YALI0_F15037g I 0.000
Z517_10389 Fonsecaea pedrosoi Z517_10389 I 0.000
Z518_01320 Rhinocladiella mackenziei Z518_01320 I 0.000
Z519_02267 Cladophialophora bantiana Z519_02267 I 0.000