CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PGSC0003DMG400038617
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400038617
T255688_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400089046
MADS box
9
56
KIEEMTKRQVIFSKRRSSLLKKAAEIAICCDVDMLFVAFSPAARLGKF
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf021248m
Mimulus guttatus
mgf021248m
N
0.708
PGSC0003DMG400036414
Solanum tuberosum
PGSC0003DMG400036414
N
0.792
PGSC0003DMG400044568
Solanum tuberosum
PGSC0003DMG400044568
N
0.792